PSIBLAST alignment of GI: 254780561 and protein with PDB id: 1a99
>gi|3891734|pdb|1A99|A Chain A, Putrescine Receptor (Potf) From E. Coli Length = 344
>gi|3891735|pdb|1A99|B Chain B, Putrescine Receptor (Potf) From E. Coli Length = 344
>gi|3891736|pdb|1A99|C Chain C, Putrescine Receptor (Potf) From E. Coli Length = 344
>gi|3891737|pdb|1A99|D Chain D, Putrescine Receptor (Potf) From E. Coli Length = 344
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/326 (9%), Positives = 80/326 (24%), Gaps = 37/326 (11%)
Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAA 86
+ L +Y ++ ++A P FE++ ++ L KL
Sbjct: 1 AEQKTLHIYNWSDYIA-----PDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDL 55
Query: 87 DIVLGFDNNLIDLARKTGLFAKS--------NIDASQLKLPIKWDDDIFVPYDYGYLAFI 138
+ A KS + + +L D+ +PY +
Sbjct: 56 VVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIG 115
Query: 139 YDKRQITQ------PPKNFDELINSTKPWKIIYQDPRTS-----------TLGLGLLLWI 181
Y+ ++ P ++D ++ K+
Sbjct: 116 YNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNST 175
Query: 182 QKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFY----LLNYG 237
+ A + G+ + ++
Sbjct: 176 KADDYTGPATDLLLKLRPNIRYFHSS-QYINDLANGDICVAIGWAGDVWQASNRAKEAKN 234
Query: 238 QDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDI 297
+ ++ EG +V A +K A +F+ +++ P + +
Sbjct: 235 GVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKA 294
Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRY 323
+ P + + + + +
Sbjct: 295 ATP--LVSAEVRENPGIYPPADVRAK 318