PSIBLAST alignment of GI: 254780561 and protein with PDB id: 1pot
>gi|157833547|pdb|1POT|A Chain A, SpermidinePUTRESCINE-Binding Protein Complexed With Spermidine (Monomer Form) Length = 325
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 44/322 (13%), Positives = 100/322 (31%), Gaps = 26/322 (8%)
Query: 27 PAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSA- 85
L Y + +V P + + F ++ ++ + KL+ + +
Sbjct: 1 DDNNTLYFYNWTEYVP-----PGLLEQFTKETGIKVIYSTYESNETMYAKLKTYKDGAYD 55
Query: 86 ------ADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIY 139
+ +I K+ L SN+D L P ++D +PY +G A
Sbjct: 56 LVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGV 115
Query: 140 D-KRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLL---LWIQKIYGDNSAQVWKK 195
+ + ++ +L ++ D + L + +
Sbjct: 116 NGDAVDPKSVTSWADLWKPEYKGSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNE 175
Query: 196 IATKTATVTKGWTE-SYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQI 254
+ V ++ +++GE + + ++ S EG +
Sbjct: 176 LKKLMPNVAAFNSDNPANPYMEGEVNLGMIWNGSAFVARQA--GTPIDVVWPKEGGIFWM 233
Query: 255 EVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLR 314
+ A +K + A + + F++ P + + YP +++ + K+L
Sbjct: 234 DSLAIPANAKNKEGALKLINFLLRPDVAKQVAE-TIGYPTPNLAARKLLSPEVANDKTLY 292
Query: 315 FNAEETTRYRNQWISSWQNAVS 336
+AE WQN V
Sbjct: 293 PDAETIKNG------EWQNDVG 308