PSIBLAST alignment of GI: 254780561 and protein with PDB id: 1y4c
>gi|61680509|pdb|1Y4C|A Chain A, Designed Helical Protein Fusion Mbp Length = 494
Score = 65.1 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/289 (10%), Positives = 72/289 (24%), Gaps = 37/289 (12%)
Query: 28 AKPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAAD 87
+ L + + + ++ + FE+ ++ + ++ G+
Sbjct: 3 EEGKLVI--WINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 88 IVLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIF-----VPYDYGYLAFIYDKR 142
+ +L P L+ IY+K
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKD 120
Query: 143 QITQPPKNFDELINSTK----PWKIIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT 198
+ PPK ++E+ K K L+ Y I
Sbjct: 121 LLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKD 180
Query: 199 KTATVT---------------------KGWTESYGFFLKGESDFVLSYSTSPGFYLLNYG 237
++ + F KGE+ ++ + +
Sbjct: 181 VGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV 240
Query: 238 QDDYVAALFSEG----HYLQIEVAAQLVRSKQPQLAQEFM-QFMISPSF 281
+G ++ + A S +LA+EF+ ++++
Sbjct: 241 NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEG 289