PSIBLAST alignment of GI: 254780561 and protein with PDB id: 3pu5
>gi|315364756|pdb|3PU5|A Chain A, The Crystal Structure Of A Putative Extracellular Solute-Binding Protein From Bordetella Parapertussis Length = 333
Score = 91.3 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 91/319 (28%), Gaps = 18/319 (5%)
Query: 34 VY-TYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADIVLG- 91
+Y T + E + FE++ ++ L+ ++ L L G G
Sbjct: 8 IYVTSSGGSFLENVRKHXAEPFEKQSGVKVTLVPGTNPAHALKILSSRGTPPYDVAAFGG 67
Query: 92 FDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVP--YDYGYLAFIYDKRQITQPPK 149
D + A+K + ++ + D YDY + Y +I K
Sbjct: 68 NDXYRLIRAKKLAQVDEKSVPSLADVPEKFKADWEGCGSLYDYSSVGIAYRPDKIQGGVK 127
Query: 150 NFDELINST---KPWKIIYQDPRTSTLGLGLLLWIQ-------KIYGDNSAQVWKKIATK 199
++ E + T + K ++ + +S + +L + S ++
Sbjct: 128 SWKEFVERTVAGEFGKQVFFNNLSSNVRGAEVLSXFGKIYGSGYGDIEASIATLERXKPH 187
Query: 200 TATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQ 259
+ + GE + + +EG V A
Sbjct: 188 IFKFFTAFNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGX-VKWVDPTEGAVSSGPVXAV 246
Query: 260 LVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DISMPDVYQ-AIRIPQKSLRFNA 317
+ K LA+ F + + Q+ + V + + + + +
Sbjct: 247 VKGGK-EDLAKAFXNYALGEEAQKAFCEAXYYGAVNRKVQYSEKLKHRLPSIDSVQLVDT 305
Query: 318 EETTRYRNQWISSWQNAVS 336
+ + + W ++
Sbjct: 306 ALLIKNXSALLDLWNKRIA 324