RPSBLAST alignment for GI: 254780561 and conserved domain: TIGR01254
>gnl|CDD|130321 TIGR01254, sfuA, ABC transporter periplasmic binding protein, thiB subfamily. The model describes thiamine ABC transporter, periplasmic protein in bacteria and archae. The protein belongs to the larger ABC transport system. It consists of at least three components: the thiamine binding periplasmic protein; an inner membrane permease; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). Length = 304
Score = 377 bits (970), Expect = e-105
Identities = 152/304 (50%), Positives = 215/304 (70%), Gaps = 1/304 (0%)
Query: 29 KPVLTVYTYNSFVADEGAGPKIKQAFERKCNCELKLIGLSDGVALLNKLRMEGENSAADI 88
+PV+TVYTY+SF AD G GP +++AFE CNC++K + L D LLN+LR+EG+N AD+
Sbjct: 1 QPVVTVYTYDSFAADWGLGPVVEKAFEADCNCKVKFVALEDAGELLNRLRLEGKNPKADV 60
Query: 89 VLGFDNNLIDLARKTGLFAKSNIDASQLKLPIKWDDDIFVPYDYGYLAFIYDKRQITQPP 148
VLG DNNL++ A KTGL A S + ++ +P W++ F+P+DYGY+AF+YDK ++ PP
Sbjct: 61 VLGLDNNLLEAASKTGLLAPSGVALDKVNVPGGWNNATFLPFDYGYVAFVYDKNKLQNPP 120
Query: 149 KNFDELINSTKPWKIIYQDPRTSTLGLGLLLWIQKIYGDNSA-QVWKKIATKTATVTKGW 207
++ EL+ + +IYQDPRTS+ GLGLLLW+Q +YG++ A Q WK++ KT TVTKGW
Sbjct: 121 QSLKELVEPEQDLLVIYQDPRTSSPGLGLLLWMQSVYGEDDAPQAWKQLRKKTVTVTKGW 180
Query: 208 TESYGFFLKGESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQ 267
+E+YG FL GE D VLSY+TSP +++L +D+Y A FSEGHYLQ+E AA+L +KQP+
Sbjct: 181 SEAYGTFLGGEYDLVLSYATSPAYHVLFEKKDNYAALNFSEGHYLQVEGAARLKGAKQPE 240
Query: 268 LAQEFMQFMISPSFQRILPTTNWMYPVVDISMPDVYQAIRIPQKSLRFNAEETTRYRNQW 327
LA +F+QF++SP+ Q +PT NWMYPVV+ ++ + + + E T R W
Sbjct: 241 LADKFVQFLLSPAVQNAIPTGNWMYPVVNGTLLPGFFKLTQQPTTTAPTPAEVTAQRQAW 300
Query: 328 ISSW 331
IS W
Sbjct: 301 ISEW 304