RPSBLAST alignment for GI: 254780561 and conserved domain: COG0687

>gnl|CDD|31031 COG0687, PotD, Spermidine/putrescine-binding periplasmic protein [Amino acid transport and metabolism]. Length = 363
 Score = 66.3 bits (161), Expect = 1e-11
 Identities = 57/366 (15%), Positives = 111/366 (30%), Gaps = 36/366 (9%)

Query: 1   MKKFARIVVGIMMITGVISYCTLDGLPAKP-VLTVYTYNSFVADEGAGPKIKQAFERKCN 59
           MKK +R     +    + +        A+   L VY +  ++        + + FE++  
Sbjct: 2   MKKLSRRSFLALAALALAALAGAAAAAAEGKTLNVYNWGGYIDPA-----LLKPFEKETG 56

Query: 60  CELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAK---------SN 110
            ++          +L KL+  G     D+V+      +    K GL             N
Sbjct: 57  IKVVYDTFDSNEEMLAKLKAGGGG--YDVVV-PSGYFVARLIKEGLLQPLDKSKLPNWKN 113

Query: 111 IDASQLKLPIKWDDDIF-VPYDYGYLAFIYDKRQIT--QPPKNFDELIN-----STKPWK 162
           +D   L  P     + + VPY +G     Y+  ++    PP ++ +L +       K   
Sbjct: 114 LDPEFLNPPKFDPGNKYSVPYFWGTTGIAYNTDKVKDAPPPTSWADLFDPEKFPGLKGKG 173

Query: 163 IIYQDPRTSTLGLGLLLWIQKIYGDNSAQVWKKIAT--KTATVTKGWTESYGF---FLKG 217
           +   D      G  L L  +     +   + K      K   V   W +   +      G
Sbjct: 174 VALLDDDREVFGAALALLGKSPNTTDPEDLKKAFDLLDKLKPVNVYWFDGSQYVQLLANG 233

Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMI 277
           E    + +S                  +  EG  L  +  A    +K    A +F+ F++
Sbjct: 234 EVVLAMGWSGDAAAAKAAKNGAPIEFVIPKEGSILWFDNLAIPKGAKNVDAAYKFINFLL 293

Query: 278 SPSFQRILPTTNWMYPVVDISMPDVYQAIR-----IPQKSLRFNAEETTRYRNQWISSWQ 332
            P     L       P    +   + + I+      P   +            + +  + 
Sbjct: 294 DPEVAAKLAEFVGYAPPNKAARKLLPKEIKDDPAIYPTAEILKKLFGQKDLGPEALRLYT 353

Query: 333 NAVSRL 338
            A   +
Sbjct: 354 KAWQEI 359