RPSBLAST alignment for GI: 254780561 and conserved domain: COG1653
>gnl|CDD|31839 COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]. Length = 433
Score = 45.0 bits (105), Expect = 3e-05
Identities = 51/274 (18%), Positives = 91/274 (33%), Gaps = 29/274 (10%)
Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPV-LTVYTYNSFVADEGAGPKIKQAFERK-C 58
+KK +++++ ++ ++ C A V +T + + + A ++ + FE++
Sbjct: 1 LKKISKLLLLLLAAALGLAACGSAAASAAGVTITFWHSWTGGEEADALEELIKEFEKENP 60
Query: 59 NCELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFA------KSNID 112
++K++ + L L A D+V L A+ GL +D
Sbjct: 61 GIKVKVVNVPGDDYLQKLLTALASGDAPDVVQLDPEWLAAFAKAGGLLEDLTDLINPKLD 120
Query: 113 ASQLKLPI----KWDDDIF-VPYDYGYLAFIY-----DKRQITQPPKNFDELINSTKPWK 162
S + +D ++ VP++ A Y K + PPK +DEL+ + K K
Sbjct: 121 LSDFPPALLDTTTYDGKLYGVPFNSSTPALFYNKDLFKKAGLKPPPKTWDELLAAAKKLK 180
Query: 163 IIYQDP-----RTSTLGLGLLLWIQKIYGDNSAQVWKKIATKTATVTKGWTESYGFFLKG 217
D G L G K + E+ F
Sbjct: 181 EKGGDVYGIAGGGGWQGEDLFFTFALFLGGAGGGFLDKDGGEAFLNDPEAVEALEFLKDL 240
Query: 218 ESDFVLSYSTSPGFYLLNYGQDDYVAALFSEGHY 251
+L S YG DD A F G
Sbjct: 241 YKKGLLPKGAS------GYGWDDAGALAFGSGKV 268