RPSBLAST alignment for GI: 254780561 and conserved domain: COG4143

>gnl|CDD|33896 COG4143, TbpA, ABC-type thiamine transport system, periplasmic component [Coenzyme metabolism]. Length = 336
 Score =  381 bits (981), Expect = e-106
 Identities = 166/340 (48%), Positives = 227/340 (66%), Gaps = 7/340 (2%)

Query: 1   MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60
           M++  R ++G  +   V +        A P LTVYTY+SF ++ G GPK+K+AFE +  C
Sbjct: 1   MRRLLRALIG--LALLVSAALGAQA--ATPTLTVYTYDSFASEWGPGPKVKKAFEAEYGC 56

Query: 61  ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120
           ++  + L DGV LLN+L +EG+N  AD+V+G DNNL+  AR+TGLFA   +DAS + +P 
Sbjct: 57  KVNFVALGDGVELLNRLILEGKNPKADVVVGLDNNLLARARETGLFAPYGVDASDVPVPE 116

Query: 121 KWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179
            W  D F +PYDYGY AF+YDK ++  PPK+  +L+      KIIYQDPRTS+ GLG LL
Sbjct: 117 GWKIDTFALPYDYGYFAFVYDKTKLKNPPKSLKDLVEPEYAGKIIYQDPRTSSPGLGFLL 176

Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238
           W   +YG D + + W K+A    TVTKGW+E+YG F KGE+  VLSY+TSP +++    +
Sbjct: 177 WTISVYGEDGAPEAWAKLADNGVTVTKGWSEAYGAFTKGEAPLVLSYTTSPAYHVYPEKK 236

Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DI 297
           D Y AALF EGHYLQ+E AA L  +K P+LA +F+QFM+SP FQ  +PTTNWMYP V ++
Sbjct: 237 DRYAAALFPEGHYLQVEGAAVLKGAKNPELADKFLQFMLSPEFQDAIPTTNWMYPAVKNV 296

Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337
            +P V+ A+  P K++  + +E    R  WIS WQ AVSR
Sbjct: 297 PLPAVFDALVKPAKTVSLSPKEVAANRKAWISEWQRAVSR 336