RPSBLAST alignment for GI: 254780561 and conserved domain: COG4143
>gnl|CDD|33896 COG4143, TbpA, ABC-type thiamine transport system, periplasmic component [Coenzyme metabolism]. Length = 336
Score = 381 bits (981), Expect = e-106
Identities = 166/340 (48%), Positives = 227/340 (66%), Gaps = 7/340 (2%)
Query: 1 MKKFARIVVGIMMITGVISYCTLDGLPAKPVLTVYTYNSFVADEGAGPKIKQAFERKCNC 60
M++ R ++G + V + A P LTVYTY+SF ++ G GPK+K+AFE + C
Sbjct: 1 MRRLLRALIG--LALLVSAALGAQA--ATPTLTVYTYDSFASEWGPGPKVKKAFEAEYGC 56
Query: 61 ELKLIGLSDGVALLNKLRMEGENSAADIVLGFDNNLIDLARKTGLFAKSNIDASQLKLPI 120
++ + L DGV LLN+L +EG+N AD+V+G DNNL+ AR+TGLFA +DAS + +P
Sbjct: 57 KVNFVALGDGVELLNRLILEGKNPKADVVVGLDNNLLARARETGLFAPYGVDASDVPVPE 116
Query: 121 KWDDDIF-VPYDYGYLAFIYDKRQITQPPKNFDELINSTKPWKIIYQDPRTSTLGLGLLL 179
W D F +PYDYGY AF+YDK ++ PPK+ +L+ KIIYQDPRTS+ GLG LL
Sbjct: 117 GWKIDTFALPYDYGYFAFVYDKTKLKNPPKSLKDLVEPEYAGKIIYQDPRTSSPGLGFLL 176
Query: 180 WIQKIYG-DNSAQVWKKIATKTATVTKGWTESYGFFLKGESDFVLSYSTSPGFYLLNYGQ 238
W +YG D + + W K+A TVTKGW+E+YG F KGE+ VLSY+TSP +++ +
Sbjct: 177 WTISVYGEDGAPEAWAKLADNGVTVTKGWSEAYGAFTKGEAPLVLSYTTSPAYHVYPEKK 236
Query: 239 DDYVAALFSEGHYLQIEVAAQLVRSKQPQLAQEFMQFMISPSFQRILPTTNWMYPVV-DI 297
D Y AALF EGHYLQ+E AA L +K P+LA +F+QFM+SP FQ +PTTNWMYP V ++
Sbjct: 237 DRYAAALFPEGHYLQVEGAAVLKGAKNPELADKFLQFMLSPEFQDAIPTTNWMYPAVKNV 296
Query: 298 SMPDVYQAIRIPQKSLRFNAEETTRYRNQWISSWQNAVSR 337
+P V+ A+ P K++ + +E R WIS WQ AVSR
Sbjct: 297 PLPAVFDALVKPAKTVSLSPKEVAANRKAWISEWQRAVSR 336