HHSEARCH alignment of GI: 254780562 and SCOP domain: d2id1a1

Alignment
>d2id1a1 d.218.1.12 (A:1-120) Hypothetical protein CV0518 {Chromobacterium violaceum [TaxId: 536]}
Probab=99.73  E-value=4e-18  Score=116.80  Aligned_cols=62  Identities=19%  Similarity=0.434  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999984368634989804888720008788951886899999999999997439
Q gi|254780562|r   15 HLDSCIATVMECLKELKAEDICHIENTSLRSLICDNMVIVSGRSTKHVASIADNLISYLKKKN   77 (77)
Q Consensus        15 ~~~~~l~~i~~~l~dkKa~dI~~ldv~~~~s~~~D~fVIatg~S~rhv~Aia~~v~~~lk~~n   77 (77)
                      +.+++++.|+++|+|+||+||++||+++ .|+++||||||||+|.||++||+++|.+.+|+.+
T Consensus         2 ~~~~l~~~i~~~l~d~Ka~DI~vldv~~-~~~~~D~~VI~Tg~S~rh~~aia~~i~~~lk~~~   63 (120)
T d2id1a1           2 EIQEISKLAIEALEDIKGKDIIELDTSK-LTSLFQRMIVATGDSNRQVKALANSVQVKLKEAG   63 (120)
T ss_dssp             CHHHHHHHHHHHHHHTTCEEEEEEEGGG-TCSSCSEEEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEECCC-CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf             8899999999999973888749997889-9752468999871678999999999999999839


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Iojap/YbeB-like
domain: Hypothetical protein CV0518
species: Chromobacterium violaceum [TaxId: 536]