HHsearch alignment for GI: 254780563 and conserved domain: COG4134
>COG4134 ABC-type uncharacterized transport system, periplasmic component [General function prediction only].
Probab=98.63 E-value=3.5e-07 Score=60.66 Aligned_cols=142 Identities=13% Similarity=0.108 Sum_probs=86.8
Q ss_pred HHHCCCCCCCCCHHH---HHH----HHHHHCCC--CCEEEEC-CHHHHHHHHHHHCCC---CCCCCCCCCCC-----C-C
Q ss_conf 987598621000013---566----76521066--6557504-223323433100001---23422234720-----0-0
Q gi|254780563|r 48 EERTGVKISPIYTSS---IQR----PPITQGSP--VDVIITK-DETSLALNEDLLHKL---PAHLIKKNSFV-----L-K 108 (195)
Q Consensus 48 ek~tgIkV~~~~~~~---~~~----~~~~~~~~--~d~~~~~-d~~~l~~~~~~l~~~---~~~~~~~~~~~-----~-~ 108 (195)
T Consensus 59 ~~kYgi~v~~~~l~~~~a~~~~~a~~AAG~~e~g~VDl~~~~g~n~p~lk~~~~Ly~~~~~~LPnwr~~d~ql~~tdf~~ 138 (384)
T COG4134 59 KAKYGIKVAIVRLDAADAVKRLIAELAAGRDEGGSVDLLWINGENFPTLKEAGLLYTPWAEDLPNWRYVDHQLPRTDFSV 138 (384)
T ss_pred HCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHCCCCHHHCHHCCCCCCCC
T ss_conf 20025178751241888888899998642556872689983575413343166202512321866012030035332578
Q ss_pred CCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC--HHHCCEEEECCC--CCCHHHHHHHHHH--------------
Q ss_conf 1222223443450588873344013445578888408--667685996289--8304999999999--------------
Q gi|254780563|r 109 NENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTN--AQWKKRLSIAPN--NISFHRLLNTMEQ-------------- 170 (195)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~--p~~kG~i~~~~~--~~s~~~~~~a~~~-------------- 170 (195)
T Consensus 139 pt~Gl~~~~~~~q~~f~yd--~~k~~~~P~s~eeLL~wA~aNP~rf~Y~~P~~gg~G~~Fl~~~~i~Lt~d~~~l~~avD 216 (384)
T COG4134 139 PTEGLESPWGGNQLVFIYD--RDKVPQVPQSFEELLVWAKANPKRFGYPRPPNGGTGTAFLKQLLIMLTGDAAALQQAVD 216 (384)
T ss_pred CCCCCCCCCCCCCCEEEEC--CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCC
T ss_conf 8776214402775238872--34478877399999999985967535689998886076999889985485576507888
Q ss_pred ----HHCHHHHHHHHHHHHHCCCCC
Q ss_conf ----608699999999986088705
Q gi|254780563|r 171 ----TPNKTVVQDFIKNITANEILT 191 (195)
Q Consensus 171 ----~~G~~~~~~~l~~l~~N~~~~ 191 (195)
T Consensus 217 pat~~k~~~p~WqYl~~Lh~~i~r~ 241 (384)
T COG4134 217 PATFAKVWAPLWQYLDELHPYIWRT 241 (384)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 0777762108999999861556013