HHsearch alignment for GI: 254780563 and conserved domain: PRK11553
>PRK11553 alkanesulfonate transporter substrate-binding subunit; Provisional.
Probab=96.74 E-value=0.041 Score=31.74 Aligned_cols=86 Identities=17% Similarity=0.112 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHHHH-HCCCCCCCCEEE-ECCCCH-HHHHHHHHHHHHHC-CCCCCCCCHHHHHHHH-HHHCCCCCE
Q ss_conf 025999999999999986-124445880899-818998-99999999999875-9862100001356676-521066655
Q gi|254780563|r 2 FKRTIYTYLLLLCGFTEA-FSTENTTKYLTL-YTDQNQ-SVMLPIIHSFEERT-GVKISPIYTSSIQRPP-ITQGSPVDV 76 (195)
Q Consensus 2 mkk~~~~~l~l~~~~~~~-~~~~~~~~~lvV-Ys~~~~-~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~-~~~~~~~d~ 76 (195)
T Consensus 1 ~~~~l~~~la~~~~~~~~~~~~~~~~~~lrIgyq~~~~~~~~~~~~~~~ek~~~~~kV~w~~F~~G~~~~eAl~aG~iD~ 80 (314)
T PRK11553 1 MRNIIKLALAGLLSVSTLAVAAESSPEALRIGYQKGSIGLVLAKSHQLLEKRFPQTKISWVEFPAGPQMLEALNVGSIDL 80 (314)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCE
T ss_conf 97799999999999987544433489759999617741589998528676617898358997897489999997699754
Q ss_pred EEECCHHHHHH
Q ss_conf 75042233234
Q gi|254780563|r 77 IITKDETSLAL 87 (195)
Q Consensus 77 ~~~~d~~~l~~ 87 (195)
T Consensus 81 ~~~g~~p~i~a 91 (314)
T PRK11553 81 GSTGDIPPIFA 91 (314)
T ss_pred EEECCHHHHHH
T ss_conf 51158589999