HHsearch alignment for GI: 254780563 and conserved domain: TIGR03227

>TIGR03227 PhnS 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate binding protein. This ABC transporter periplasmic substrate binding protein component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238). The protein contains a match to pfam01547 for the "Bacterial extracellular solute-binding protein" domain.
Probab=100.00  E-value=2.3e-35  Score=221.44  Aligned_cols=186  Identities=17%  Similarity=0.180  Sum_probs=145.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC-----HHHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHHHCCC
Q ss_conf             02599999999999998612444588089981899-----89999999999987598621000013566---76521066
Q gi|254780563|r    2 FKRTIYTYLLLLCGFTEAFSTENTTKYLTLYTDQN-----QSVMLPIIHSFEERTGVKISPIYTSSIQR---PPITQGSP   73 (195)
Q Consensus         2 mkk~~~~~l~l~~~~~~~~~~~~~~~~lvVYs~~~-----~~~~~~~~~~Fek~tgIkV~~~~~~~~~~---~~~~~~~~   73 (195)
T Consensus        12 ~~~~~~~~~~~~~~~~~-~~~a~a~~~~~vy~~~~~~~~~~~~~~~~~~aFek~tGikV~~v~~~sge~laRl~aEk~nP   90 (367)
T TIGR03227        12 LRRFALAAGAAALLQGA-AAPAQAAAVVLVYSADGLEDGDNSLYQDQFDAFEKAEGIKVNIVEAGGGEVVERAAKEKGNP   90 (367)
T ss_pred             HHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCC
T ss_conf             99999999999998642-35554586599996466434443468887688888669838999897799999999522799


Q ss_pred             -CCEEEECCHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCE
Q ss_conf             -655750422332-343310000123422234720001222223443450588873344013445578888408667685
Q gi|254780563|r   74 -VDVIITKDETSL-ALNEDLLHKLPAHLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKR  151 (195)
Q Consensus        74 -~d~~~~~d~~~l-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~  151 (195)
T Consensus        91 qaDVv~~~d~~~~~A~~~GLl~py~~~~~~~ip~~~k~~dg~~~~~~~~~~~~~yN~~~~k--~~PkSW~DL~dP~ykgk  168 (367)
T TIGR03227        91 KADVIVTAPPFIQQAAAEGLLANFNSDAAKAIPAIAKAADGLWAPFVKNYFSFAINPKLLK--SAPASFADLLDADFKGK  168 (367)
T ss_pred             CCEEEEECCHHHHHHHHCCCCCCCCCCCHHHCCHHHHCCCCCEEEEECCEEEEEEEHHHHC--CCCCCHHHHHCCCCCCE
T ss_conf             7209997857999999788956278966455777663779838988555799999857705--79988998728533782


Q ss_pred             EEECCCC--CCHHHHHHHHHHHHC-HHHHHHHHHHHHHCCCC
Q ss_conf             9962898--304999999999608-69999999998608870
Q gi|254780563|r  152 LSIAPNN--ISFHRLLNTMEQTPN-KTVVQDFIKNITANEIL  190 (195)
Q Consensus       152 i~~~~~~--~s~~~~~~a~~~~~G-~~~~~~~l~~l~~N~~~  190 (195)
T Consensus       169 I~~~dP~tS~~g~~~l~~~~~~~G~eD~a~~~~~~L~~N~~~  210 (367)
T TIGR03227       169 LAYSNPAQAADGMAVIILAFALFGSEDAAFAYLAKLEANNKF  210 (367)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCE
T ss_conf             895287766179999999999709853889999988744867