HHsearch results for GI: 254780563 and protein with PDBid: 1j1n_A
>1j1n_A ALGQ2; alginate, suger binding protein; HET: BEM MAV LGU; 1.60A {Sphingomonas SP} SCOP: c.94.1.1 PDB: 1kwh_A 1y3n_A* 1y3p_A* 1y3q_A
Probab=97.11 E-value=0.0004 Score=41.96 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=68.8
Q ss_pred CCCCEEEECCCCHH----HHHHHHHHHHHHCCCCCCCCCHH---H-HHHH--HHHHCCCCCEEEECCH-HH--HHHHHHH
Q ss_conf 58808998189989----99999999998759862100001---3-5667--6521066655750422-33--2343310
Q gi|254780563|r 25 TTKYLTLYTDQNQS----VMLPIIHSFEERTGVKISPIYTS---S-IQRP--PITQGSPVDVIITKDE-TS--LALNEDL 91 (195)
Q Consensus 25 ~~~~lvVYs~~~~~----~~~~~~~~Fek~tgIkV~~~~~~---~-~~~~--~~~~~~~~d~~~~~d~-~~--l~~~~~~ 91 (195)
..-+|+||-+.... ...++.+.+++++||+|+++... . .+.+ ...-++..|+++..+. .. .....|.
T Consensus 9 ~pvtl~~~~~~~~~~~~~~~~~~~k~~~~~~~iki~~~~~~~~~d~~~kl~~~lasg~~PDii~~~~~~~~~~~~~~~G~ 88 (492)
T 1j1n_A 9 KPLTLKIHMHFRDKWVWDENWPVAKESFRLTNVKLQSVANKAATNSQEQFNLMMASGDLPDVVGGDNLKDKFIQYGQEGA 88 (492)
T ss_dssp SCEEEEEEEEETTTEECCTTSHHHHHHHHHHSEEEEECSCTTCCCHHHHHHHHHTSSCCCSEEEESSCHHHHHHHHHTTS
T ss_pred CCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCC
T ss_conf 98799999706865554326299999736669789999668977899999999978897869998984799999998899
Q ss_pred HCCCCCCC----------CCCCCC---CCCCCCCCCCCCCC-----CEEEEEEEHHHHCCC--CCCCCHHHHCC
Q ss_conf 00012342----------223472---00012222234434-----505888733440134--45578888408
Q gi|254780563|r 92 LHKLPAHL----------IKKNSF---VLKNENKKLMRISF-----DTQVLAYSTKRIKIA--DLPKSVFDLTN 145 (195)
Q Consensus 92 l~~~~~~~----------~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~n~~~~~~~--~~P~sw~DL~~ 145 (195)
+.++..-. ....+. .....+|..+++.. ...++.||.+.++.. ++|++|+|+.+
T Consensus 89 l~dL~d~~~~~~p~~~~~~~~~~~~~~~~~~~dGk~Y~iP~~~~~~~~~~~~ynkd~~~~~G~~~p~t~de~~~ 162 (492)
T 1j1n_A 89 FVPLNKLIDQYAPHIKAFFKSHPEVERAIKAPDGNIYFIPYVPDGVVARGYFIREDWLKKLNLKPPQNIDELYT 162 (492)
T ss_dssp BCCCHHHHHHHCHHHHHHHHHCHHHHHHHCCTTSCCCCEEEECCCSCCEEEEEEHHHHHHTTCCCCCBHHHHHH
T ss_pred EEECHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHCCCCCCCCHHHHHH
T ss_conf 89887999761700688877668999960068981785154357774027998756898749988863788999