HHsearch results for GI: 254780563 and protein with PDBid: 1nnf_A
>1nnf_A Iron-utilization periplasmic protein; iron-binding protein, EDTA-Fe-protein complex, metal binding protein; HET: EDT; 1.10A {Haemophilus influenzae} SCOP: c.94.1.1 PDB: 1mrp_A 1d9v_A 1qvs_A 2o6a_A 2o68_A 2o69_A 1qw0_A 1o7t_A* 1xc1_A* 1r1n_A* 1d9y_A
Probab=99.92 E-value=2.2e-24 Score=157.60 Aligned_cols=163 Identities=20% Similarity=0.349 Sum_probs=138.1
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HHHCCCCCEEEECCHHHH--HHHHHHHCCCCCCCCC
Q ss_conf 0899818998999999999998759862100001356676----521066655750422332--3433100001234222
Q gi|254780563|r 28 YLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPP----ITQGSPVDVIITKDETSL--ALNEDLLHKLPAHLIK 101 (195)
Q Consensus 28 ~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~----~~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~~~~ 101 (195)
+|+|||+.+++.+++++++||++|||||+++..++.+... ++.+.++||+++.+...+ +.+.|++.+++.+..+
T Consensus 1 ~~~vys~~~~~~~~~i~~~Fe~~tGIkV~~~~~~~~~~~~kl~aeg~~~~~DV~~~~~~~~~~~~~~~gll~~~~~~~~~ 80 (309)
T 1nnf_A 1 DITVYNGQQKEAATAVAKAFEQETGIKVTLNSGKSEQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIQ 80 (309)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHSCCCEEEEECCHHHHHHHHHHHGGGCCCSEEEESCGGGHHHHHHTTCBCCCCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 97999598988999999999885597799998970999999997468999878996878999999867986644423342
Q ss_pred CCCCCC--CCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHHCHHHHHH
Q ss_conf 347200--012222234434505888733440134455788884086676859962898304999999999608699999
Q gi|254780563|r 102 KNSFVL--KNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTMEQTPNKTVVQD 179 (195)
Q Consensus 102 ~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~~~~G~~~~~~ 179 (195)
...... .+.++++++......++.||++.+....+|.+|+||++++|++++.+++++..+..+....+...|.+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~p~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (309)
T 1nnf_A 81 QTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALN 160 (309)
T ss_dssp TTCCTTCCCCTTSCCEEEEEEEEEEEEETTTCCGGGSCSSGGGGGSGGGTTTEEECTTSHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHCCCCCCCCEEEEEEEEEEEEEEHHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
T ss_conf 21022124466762788774125787523330354454668874160532033347753016777778988507388999
Q ss_pred HHHHHHHCCCC
Q ss_conf 99998608870
Q gi|254780563|r 180 FIKNITANEIL 190 (195)
Q Consensus 180 ~l~~l~~N~~~ 190 (195)
++++|+.|+.+
T Consensus 161 ~~~~l~~~~~~ 171 (309)
T 1nnf_A 161 WLKGLKENGKL 171 (309)
T ss_dssp HHHHHHHHEEE
T ss_pred HHHHHHHHHHC
T ss_conf 99998753101