HHsearch results for GI: 254780563 and protein with PDBid: 1nnf_A

>1nnf_A Iron-utilization periplasmic protein; iron-binding protein, EDTA-Fe-protein complex, metal binding protein; HET: EDT; 1.10A {Haemophilus influenzae} SCOP: c.94.1.1 PDB: 1mrp_A 1d9v_A 1qvs_A 2o6a_A 2o68_A 2o69_A 1qw0_A 1o7t_A* 1xc1_A* 1r1n_A* 1d9y_A
Probab=99.92  E-value=2.2e-24  Score=157.60  Aligned_cols=163  Identities=20%  Similarity=0.349  Sum_probs=138.1

Q ss_pred             CEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----HHHCCCCCEEEECCHHHH--HHHHHHHCCCCCCCCC
Q ss_conf             0899818998999999999998759862100001356676----521066655750422332--3433100001234222
Q gi|254780563|r   28 YLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRPP----ITQGSPVDVIITKDETSL--ALNEDLLHKLPAHLIK  101 (195)
Q Consensus        28 ~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~----~~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~~~~~  101 (195)
                      +|+|||+.+++.+++++++||++|||||+++..++.+...    ++.+.++||+++.+...+  +.+.|++.+++.+..+
T Consensus         1 ~~~vys~~~~~~~~~i~~~Fe~~tGIkV~~~~~~~~~~~~kl~aeg~~~~~DV~~~~~~~~~~~~~~~gll~~~~~~~~~   80 (309)
T 1nnf_A            1 DITVYNGQQKEAATAVAKAFEQETGIKVTLNSGKSEQLAGQLKEEGDKTPADVFYTEQTATFADLSEAGLLAPISEQTIQ   80 (309)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHSCCCEEEEECCHHHHHHHHHHHGGGCCCSEEEESCGGGHHHHHHTTCBCCCCHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCHHHH
T ss_conf             97999598988999999999885597799998970999999997468999878996878999999867986644423342


Q ss_pred             CCCCCC--CCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHHCHHHHHH
Q ss_conf             347200--012222234434505888733440134455788884086676859962898304999999999608699999
Q gi|254780563|r  102 KNSFVL--KNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTMEQTPNKTVVQD  179 (195)
Q Consensus       102 ~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~~~~G~~~~~~  179 (195)
                      ......  .+.++++++......++.||++.+....+|.+|+||++++|++++.+++++..+..+....+...|.+.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~p~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  160 (309)
T 1nnf_A           81 QTAQKGVPLAPKKDWIALSGRSRVVVYDHTKLSEKDMEKSVLDYATPKWKGKIGYVSTSGAFLEQVVALSKMKGDKVALN  160 (309)
T ss_dssp             TTCCTTCCCCTTSCCEEEEEEEEEEEEETTTCCGGGSCSSGGGGGSGGGTTTEEECTTSHHHHHHHHHHHHHHCHHHHHH
T ss_pred             HHHHHHCCCCCCCCEEEEEEEEEEEEEEHHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHH
T ss_conf             21022124466762788774125787523330354454668874160532033347753016777778988507388999


Q ss_pred             HHHHHHHCCCC
Q ss_conf             99998608870
Q gi|254780563|r  180 FIKNITANEIL  190 (195)
Q Consensus       180 ~l~~l~~N~~~  190 (195)
                      ++++|+.|+.+
T Consensus       161 ~~~~l~~~~~~  171 (309)
T 1nnf_A          161 WLKGLKENGKL  171 (309)
T ss_dssp             HHHHHHHHEEE
T ss_pred             HHHHHHHHHHC
T ss_conf             99998753101