HHsearch results for GI: 254780563 and protein with PDBid: 1xvx_A

>1xvx_A YFUA; periplasmic iron binding protein; 1.53A {Yersinia enterocolitica} SCOP: c.94.1.1 PDB: 1xvy_A*
Probab=99.96  E-value=3e-28  Score=179.59  Aligned_cols=166  Identities=21%  Similarity=0.393  Sum_probs=146.2

Q ss_pred             CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HH-HHCCCCCEEEECCHHHH--HHHHHHHCCCCC
Q ss_conf             4588089981899899999999999875986210000135667---65-21066655750422332--343310000123
Q gi|254780563|r   24 NTTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQRP---PI-TQGSPVDVIITKDETSL--ALNEDLLHKLPA   97 (195)
Q Consensus        24 ~~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~---~~-~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~   97 (195)
                      +.+++|+|||+++++.+++++++||++|||+|+++.+++.+..   .. ++++++|++++.+...+  ..+.+++.++.+
T Consensus         2 ~~~~~lvVYs~~~e~~~~~l~~~FeketGIkV~~~~~~~~~~~~ki~aeg~~~~~Dv~~~~~~~~~~~~~~~gl~~~~~~   81 (312)
T 1xvx_A            2 SNDSGIVVYNAQHENLVKSWVDGFTKDTGIKVTLRNGGDSELGNQLVQEGSASPADVFLTENSPAMVLVDNAKLFAPLDA   81 (312)
T ss_dssp             CCCSCEEEEECSCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHGGGCCCSEEEESSSHHHHHHHHTTCBCCCCH
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHH
T ss_conf             98984999979887799999999888659889999898099999999638999963999887789888775152454311


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHHHHHHHHHCHHHH
Q ss_conf             42223472000122222344345058887334401344557888840866768599628983049999999996086999
Q gi|254780563|r   98 HLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLLNTMEQTPNKTVV  177 (195)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~~a~~~~~G~~~~  177 (195)
                      ....++++.+++++++|+++.....+++||++.++..++|+||+||.+|.++|+++++.++.++..++..+....|.+.+
T Consensus        82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~yn~~~~~~~~~P~t~~dl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  161 (312)
T 1xvx_A           82 VTQAQVAQEYRPEHGRWTGIAARSTVFVYNPEKISEAELPKSIMDLAKPEWKGRWAASPSGADFQAIVSAMLELKGEKAT  161 (312)
T ss_dssp             HHHHHBCGGGSCSSSSCEEEEEEEEEEEECTTTSCGGGSCSSGGGGGSGGGTTSEEECTTSHHHHHHHHHHHHHHCHHHH
T ss_pred             CCHHHHHHHHCCCCCEEEEEEEEEEEEEECHHHCCCCCCCCCHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             00222236526679808999864699997100146566987899871402124210120145688998876641335679


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             999999860887
Q gi|254780563|r  178 QDFIKNITANEI  189 (195)
Q Consensus       178 ~~~l~~l~~N~~  189 (195)
                      +++++.++.|..
T Consensus       162 ~~~~~~~~~~~~  173 (312)
T 1xvx_A          162 LEWLKAMKTNFT  173 (312)
T ss_dssp             HHHHHHHHHHEE
T ss_pred             HHHHHHHHHCCC
T ss_conf             999986310441