HHsearch results for GI: 254780563 and protein with PDBid: 2v84_A
>2v84_A Spermidine/putrescine ABC transporter, periplasmic binding protein; polyamine binding, syphilis, lipoprotein, transport protein; HET: MES; 1.78A {Treponema pallidum}
Probab=99.72 E-value=1.5e-17 Score=118.65 Aligned_cols=151 Identities=12% Similarity=0.090 Sum_probs=100.8
Q ss_pred HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH---HHHHHCCCCCEEEECCHH-HHHHHHHHH
Q ss_conf 9861244458808998189989999999999987598621000013566---765210666557504223-323433100
Q gi|254780563|r 17 TEAFSTENTTKYLTLYTDQNQSVMLPIIHSFEERTGVKISPIYTSSIQR---PPITQGSPVDVIITKDET-SLALNEDLL 92 (195)
Q Consensus 17 ~~~~~~~~~~~~lvVYs~~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~---~~~~~~~~~d~~~~~d~~-~l~~~~~~l 92 (195)
..++.-.+++++|+||++..+ ..+.++++||++|||+|++...++.+. .++.++.+.|+++..+.. ....+.|++
T Consensus 15 ~~~~~~~~~~~~L~v~~W~~y-~~~~~i~~Fe~~~gIkV~~~~~~~~~~~~~kl~ag~~~~Dvv~~~~~~~~~~~~~gll 93 (343)
T 2v84_A 15 EGRGRLQTRQDVLYLYNWTYY-TPTSLIKKFEQQYNVQVVYDDYASNEDMFAKLSIGASGYDLVVPSGDFVSIMKRKHLL 93 (343)
T ss_dssp ----------CEEEEEEETTT-SCHHHHHHHHHHHTCEEEEEEESCHHHHHHHHSSSCCSCSEECCBHHHHHHHHHTTCE
T ss_pred CCCCCCCCCCCEEEEEECCCC-CCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCC
T ss_conf 787653355898999947774-7989999999997988999958998999999982899999899798999999977996
Q ss_pred CCCCCCC---CCCCCCCCCCC------CCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHH
Q ss_conf 0012342---22347200012------22223443450588873344013445578888408667685996289830499
Q gi|254780563|r 93 HKLPAHL---IKKNSFVLKNE------NKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHR 163 (195)
Q Consensus 93 ~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~ 163 (195)
++++... ..++.+.++.. ..+.+|+.....+++||++.++ .+|+||.||++|+|+|++++.++....
T Consensus 94 ~~ld~~~~~~~~~i~~~~~~~~~~~~g~~y~vP~~~~~~~l~YNkd~~~--~~p~tw~~l~~~~~~g~~~~~~~~~~~-- 169 (343)
T 2v84_A 94 EKIDLSKIPNVQFIKESVRARIAYDPKMEYSVPYYLGAAGIAVNKKAVP--SYARTWSIFSRKDLAYRMSMMDDMREV-- 169 (343)
T ss_dssp ECCCGGGCGGGGGBCHHHHHHCTTSTTCSSCEEEEEECCEEEEETTTCC--SCCSSGGGGGCGGGTTSEEECSCHHHH--
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEHHHCC--CCCCCHHHHHHHHHCCCCCCCCCHHHH--
T ss_conf 5478455410544036653133107998478788853258998631158--875508887678752676667862679--
Q ss_pred HHHHHHHHH
Q ss_conf 999999960
Q gi|254780563|r 164 LLNTMEQTP 172 (195)
Q Consensus 164 ~~~a~~~~~ 172 (195)
+..++....
T Consensus 170 ~~~~l~~~G 178 (343)
T 2v84_A 170 MGAALASLG 178 (343)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHC
T ss_conf 999999838