HHsearch results for GI: 254780563 and protein with PDBid: 2z8f_A
>2z8f_A Galacto-N-biose/lacto-N-biose I transporter substrate-binding protein; ABC transporter, mucin core-1, human MILK oligosacchalide; HET: BGC GAL NAG MES; 1.65A {Bifidobacterium longum} PDB: 2z8e_A* 2z8d_A*
Probab=98.51 E-value=6.1e-07 Score=58.08 Aligned_cols=153 Identities=8% Similarity=0.120 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHC-CCCCCCCCH--HH---HH---HHHHHHCCCCCEEEE-CCHHHHHHHHHHHCCCCC---CCCCCCC
Q ss_conf 99999999999875-986210000--13---56---676521066655750-422332343310000123---4222347
Q gi|254780563|r 38 SVMLPIIHSFEERT-GVKISPIYT--SS---IQ---RPPITQGSPVDVIIT-KDETSLALNEDLLHKLPA---HLIKKNS 104 (195)
Q Consensus 38 ~~~~~~~~~Fek~t-gIkV~~~~~--~~---~~---~~~~~~~~~~d~~~~-~d~~~l~~~~~~l~~~~~---~~~~~~~ 104 (195)
..++.++++|+|++ ||+|++... +. .+ ..+... +..|++.. .+........|.+.++.. .......
T Consensus 31 ~~~~~~i~~F~k~~p~i~V~~~~~~~~~~d~~~kl~~~~~ag-~~pDi~~~~~~~~~~~~~~g~l~dL~~~~~~~~~~~~ 109 (412)
T 2z8f_A 31 TLVNDIVAKWNKQHPDIQVKATKFDGKASDMIKKLETDVKSG-EAPDLAQVGYAELPEVFTKGLLQDVTQYAEQYKNDFA 109 (412)
T ss_dssp CCHHHHHHHHHHHCTTEEEEEEECSSCGGGHHHHHHHHHHHT-CCCSEEEEEGGGHHHHHHTTCBCCCHHHHHHHGGGBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHCC-CCCEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHCC
T ss_conf 999999999998883928999982797789999999998679-9886999891889999987995538154666576457
Q ss_pred CCCC-----CCCCCCCCCCCCEEEEEEEHHHHCCC---CCCCCHHHHCCH--HH--CCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 2000-----12222234434505888733440134---455788884086--67--685996289830499999999960
Q gi|254780563|r 105 FVLK-----NENKKLMRISFDTQVLAYSTKRIKIA---DLPKSVFDLTNA--QW--KKRLSIAPNNISFHRLLNTMEQTP 172 (195)
Q Consensus 105 ~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~---~~P~sw~DL~~p--~~--kG~i~~~~~~~s~~~~~~a~~~~~ 172 (195)
+... +..-+.+|......++.||++.+... ++|++|+||.+- +. +|+..++-.......++..+....
T Consensus 110 ~~~~~~~~~dGk~y~iP~~~~~~~~~ynkd~~~~~G~~~~P~Twde~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 189 (412)
T 2z8f_A 110 SGPYSLVQVGGKAYGLPQDTGPLVYFYNKAEFEKLGITEIPQTADEFIAAAKTAAAAGKYIMSYQPDEAGNMISGLAGAS 189 (412)
T ss_dssp HHHHHTTEETTEECEEECBCCBEEEEEEHHHHHHTTCCSCCCBHHHHHHHHHHHHHTTCBSCBCCGGGTTTHHHHHHHTT
T ss_pred HHHHHHEEECCEEEEEEEECCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCC
T ss_conf 99897508999999999743760699971137765887898739999999999985496267625776655201344314
Q ss_pred C------------------HHHHHHHHHHHHHCCCCC
Q ss_conf 8------------------699999999986088705
Q gi|254780563|r 173 N------------------KTVVQDFIKNITANEILT 191 (195)
Q Consensus 173 G------------------~~~~~~~l~~l~~N~~~~ 191 (195)
| ..++.+|++.|...+...
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 226 (412)
T 2z8f_A 190 GGWYKVKGDSWVVNTETDGSKATADFYQQLLDAKAAT 226 (412)
T ss_dssp CCSEEEETTEEEECCCCHHHHHHHHHHHHHHHTTCSB
T ss_pred CCEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 6334226872123259999999999999999749988