HHsearch results for GI: 254780563 and protein with PDBid: 3iot_A
>3iot_A Maltose-binding protein, huntingtin fusion protein; HTT-EX1, HD, sugar transport, transport, apoptosis, cytoplasm, disease mutation; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=98.99 E-value=3.9e-09 Score=70.55 Aligned_cols=167 Identities=14% Similarity=0.130 Sum_probs=95.7
Q ss_pred CCCCCEEEECC--CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HHHCCCCCEEEEC-CHHHHHHHHHHHCCCCC
Q ss_conf 45880899818--998999999999998759862100001356676---5210666557504-22332343310000123
Q gi|254780563|r 24 NTTKYLTLYTD--QNQSVMLPIIHSFEERTGVKISPIYTSSIQRPP---ITQGSPVDVIITK-DETSLALNEDLLHKLPA 97 (195)
Q Consensus 24 ~~~~~lvVYs~--~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~---~~~~~~~d~~~~~-d~~~l~~~~~~l~~~~~ 97 (195)
.++++|+|+.+ ...+.+.+++++||+++||+|++...+.....+ ...+...|+++.. +........|++.++..
T Consensus 2 ~eeG~itiW~~~~~~~~~l~e~~~~Fe~~~gI~V~~~~~~d~~~kl~t~~~aG~~PDVi~~~~~~~~~~~~~G~l~dL~~ 81 (449)
T 3iot_A 2 IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITP 81 (449)
T ss_dssp CCSSSEEEECCTTSCHHHHHHHHHHHHHHHSCCEEEECCTTHHHHHHHHGGGTCSCSEEEEETTTHHHHHHTTCBCCCCC
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCC
T ss_conf 87648999968982389999999997316295799985888999999998679998699999078999998889320891
Q ss_pred CCC--CCCCCCCCC---CCC--CCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC----HHHCCEEEECCCCCCHHHHHH
Q ss_conf 422--234720001---222--223443450588873344013445578888408----667685996289830499999
Q gi|254780563|r 98 HLI--KKNSFVLKN---ENK--KLMRISFDTQVLAYSTKRIKIADLPKSVFDLTN----AQWKKRLSIAPNNISFHRLLN 166 (195)
Q Consensus 98 ~~~--~~~~~~~~~---~~~--~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~----p~~kG~i~~~~~~~s~~~~~~ 166 (195)
... +...+...+ .+| +.+++.....+++||++.++ ++|++|+||.+ ..-+|...+.-+......+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~dGk~YgvP~~~~~~~l~YNkdl~~--e~P~Twdel~~~a~~~~~~~~~~~~~~~~~~~~~~~ 159 (449)
T 3iot_A 82 DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP--NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWP 159 (449)
T ss_dssp CHHHHTTBCHHHHTTSBSSSCBCCEEEEEEECEEEEETTTCS--SCCSBGGGHHHHHHHHHTTTCBSCCCCCSCHHHHHH
T ss_pred CHHHHHHCCHHHHHHCEECCEEEECCCCCCCEEEEEECCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 644375458888865479999971344367269999750111--112057899987543211477663147653112466
Q ss_pred HHHHHHC---------------------HHHHHHHHHHHHHCCCCCC
Q ss_conf 9999608---------------------6999999999860887056
Q gi|254780563|r 167 TMEQTPN---------------------KTVVQDFIKNITANEILTK 192 (195)
Q Consensus 167 a~~~~~G---------------------~~~~~~~l~~l~~N~~~~~ 192 (195)
.+.+..| ...+.+|++.|..++...+
T Consensus 160 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~l~~~~~~~~ 206 (449)
T 3iot_A 160 LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA 206 (449)
T ss_dssp HHTTTTCBSSEECSSCEETTCCBSSSHHHHHHHHHHHHHHHHTSSCT
T ss_pred HHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 78751782211345765433345587899999999999997489885