HHsearch results for GI: 254780563 and protein with PDBid: 3iot_A

>3iot_A Maltose-binding protein, huntingtin fusion protein; HTT-EX1, HD, sugar transport, transport, apoptosis, cytoplasm, disease mutation; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=98.99  E-value=3.9e-09  Score=70.55  Aligned_cols=167  Identities=14%  Similarity=0.130  Sum_probs=95.7

Q ss_pred             CCCCCEEEECC--CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HHHCCCCCEEEEC-CHHHHHHHHHHHCCCCC
Q ss_conf             45880899818--998999999999998759862100001356676---5210666557504-22332343310000123
Q gi|254780563|r   24 NTTKYLTLYTD--QNQSVMLPIIHSFEERTGVKISPIYTSSIQRPP---ITQGSPVDVIITK-DETSLALNEDLLHKLPA   97 (195)
Q Consensus        24 ~~~~~lvVYs~--~~~~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~---~~~~~~~d~~~~~-d~~~l~~~~~~l~~~~~   97 (195)
                      .++++|+|+.+  ...+.+.+++++||+++||+|++...+.....+   ...+...|+++.. +........|++.++..
T Consensus         2 ~eeG~itiW~~~~~~~~~l~e~~~~Fe~~~gI~V~~~~~~d~~~kl~t~~~aG~~PDVi~~~~~~~~~~~~~G~l~dL~~   81 (449)
T 3iot_A            2 IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITP   81 (449)
T ss_dssp             CCSSSEEEECCTTSCHHHHHHHHHHHHHHHSCCEEEECCTTHHHHHHHHGGGTCSCSEEEEETTTHHHHHHTTCBCCCCC
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCC
T ss_conf             87648999968982389999999997316295799985888999999998679998699999078999998889320891


Q ss_pred             CCC--CCCCCCCCC---CCC--CCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC----HHHCCEEEECCCCCCHHHHHH
Q ss_conf             422--234720001---222--223443450588873344013445578888408----667685996289830499999
Q gi|254780563|r   98 HLI--KKNSFVLKN---ENK--KLMRISFDTQVLAYSTKRIKIADLPKSVFDLTN----AQWKKRLSIAPNNISFHRLLN  166 (195)
Q Consensus        98 ~~~--~~~~~~~~~---~~~--~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~----p~~kG~i~~~~~~~s~~~~~~  166 (195)
                      ...  +...+...+   .+|  +.+++.....+++||++.++  ++|++|+||.+    ..-+|...+.-+......+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~dGk~YgvP~~~~~~~l~YNkdl~~--e~P~Twdel~~~a~~~~~~~~~~~~~~~~~~~~~~~  159 (449)
T 3iot_A           82 DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLP--NPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWP  159 (449)
T ss_dssp             CHHHHTTBCHHHHTTSBSSSCBCCEEEEEEECEEEEETTTCS--SCCSBGGGHHHHHHHHHTTTCBSCCCCCSCHHHHHH
T ss_pred             CHHHHHHCCHHHHHHCEECCEEEECCCCCCCEEEEEECCCCC--CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf             644375458888865479999971344367269999750111--112057899987543211477663147653112466


Q ss_pred             HHHHHHC---------------------HHHHHHHHHHHHHCCCCCC
Q ss_conf             9999608---------------------6999999999860887056
Q gi|254780563|r  167 TMEQTPN---------------------KTVVQDFIKNITANEILTK  192 (195)
Q Consensus       167 a~~~~~G---------------------~~~~~~~l~~l~~N~~~~~  192 (195)
                      .+.+..|                     ...+.+|++.|..++...+
T Consensus       160 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~l~~~~~~~~  206 (449)
T 3iot_A          160 LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA  206 (449)
T ss_dssp             HHTTTTCBSSEECSSCEETTCCBSSSHHHHHHHHHHHHHHHHTSSCT
T ss_pred             HHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             78751782211345765433345587899999999999997489885