HHsearch results for GI: 254780563 and protein with PDBid: 3kn3_A

>3kn3_A Putative periplasmic protein; alpha-beta structure, periplasmic binding protein fold, structural genomics, PSI-2; HET: GTT CIT; 2.41A {Wolinella succinogenes}
Probab=98.70  E-value=5.2e-08  Score=64.18  Aligned_cols=119  Identities=13%  Similarity=0.099  Sum_probs=72.2

Q ss_pred             CCCCCEEEECCCCH---HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHH--HHHHCCCCCC
Q ss_conf             45880899818998---999999999998759862100001356676521066655750422332343--3100001234
Q gi|254780563|r   24 NTTKYLTLYTDQNQ---SVMLPIIHSFEERTGVKISPIYTSSIQRPPITQGSPVDVIITKDETSLALN--EDLLHKLPAH   98 (195)
Q Consensus        24 ~~~~~lvVYs~~~~---~~~~~~~~~Fek~tgIkV~~~~~~~~~~~~~~~~~~~d~~~~~d~~~l~~~--~~~l~~~~~~   98 (195)
                      +.+.||+|+++.+.   .+++++.++||++|||+|+++.+++.+.+.+.+....|+++..+.......  .+......  
T Consensus         2 ~aa~~l~i~~~~S~~~~~l~~~l~~~Fe~~tgikV~~~~~~Sg~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--   79 (242)
T 3kn3_A            2 NAAAELRMATTTSTDNTGLLDVLAPAYKKDTGVDLKWVAVGTGNALKLGENCDVDVVFVHAPKVELEYVEKGFGIDRT--   79 (242)
T ss_dssp             --CCEEEEEEEHHHHHHTHHHHHHHHHHHHHSCEEEEEEECHHHHHHHHHTTCCSEEEECCHHHHHHHHHHTSEEEEE--
T ss_pred             CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCC--
T ss_conf             977568999972775231499999999998697799997784999998864788554304505479998715774123--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEE-ECCCCCCHH
Q ss_conf             2223472000122222344345058887334401344557888840866768599-628983049
Q gi|254780563|r   99 LIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLS-IAPNNISFH  162 (195)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~-~~~~~~s~~  162 (195)
                                       .......+++++.. ...+..+..|.|++++.+.+++. .+++.+++.
T Consensus        80 -----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  126 (242)
T 3kn3_A           80 -----------------PVMYNDFVIIGNPS-FKQKFTGMSVAEAFKLIEKEQVKFVSRGDKSGT  126 (242)
T ss_dssp             -----------------EEECSCEEEEECTH-HHHHHTTCCHHHHHHHHHHHTCCEEECCSSCHH
T ss_pred             -----------------CHHHCCEEEEEECC-CCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHH
T ss_conf             -----------------11002303775247-765444311455433554057235589884599