HHsearch results for GI: 254780563 and protein with PDBid: 3omb_A
>3omb_A Extracellular solute-binding protein, family 1; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG; 2.10A {Bifidobacterium longum subsp}
Probab=98.56 E-value=4.3e-08 Score=64.61 Aligned_cols=106 Identities=13% Similarity=0.104 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHH---HH---HHHHHHCCCCCEEEE-CCHHHHHHHHHHHCCCCCCCC---------CC
Q ss_conf 999999999987598621000013---56---676521066655750-422332343310000123422---------23
Q gi|254780563|r 39 VMLPIIHSFEERTGVKISPIYTSS---IQ---RPPITQGSPVDVIIT-KDETSLALNEDLLHKLPAHLI---------KK 102 (195)
Q Consensus 39 ~~~~~~~~Fek~tgIkV~~~~~~~---~~---~~~~~~~~~~d~~~~-~d~~~l~~~~~~l~~~~~~~~---------~~ 102 (195)
...++.+.|++++||+|++...+. .+ .++... ...|+++. .+......+.|.+.++..-.. ..
T Consensus 56 ~~~~~~~~~e~~~gi~v~~~~~~~~~~~~kl~~~~asg-~~PDi~~~~~~~~~~~~~~G~l~dL~d~~~~~~~~~~~~~~ 134 (535)
T 3omb_A 56 ANMQWAKDLEADCDCKIEWQEVTREAWAQQKNATLASG-DIADVNLNGYGAVEAYQYPGMFEDLSKDLDKLPNVKAFFKQ 134 (535)
T ss_dssp GGCHHHHHHHHHHTSEEEEEEEEHHHHHHHHHHHHHHT-CCCSEEESSCCTHHHHHSTTSBCCGGGGGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCC-CCCEEEEECCHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHH
T ss_conf 99999999986649789999789268999999999789-98869998938799999869976422444422103444543
Q ss_pred CCC---CCCCCCCCCCCCC--------CCEEEEEEEHHHHCCC--CCCCCHHHHCC
Q ss_conf 472---0001222223443--------4505888733440134--45578888408
Q gi|254780563|r 103 NSF---VLKNENKKLMRIS--------FDTQVLAYSTKRIKIA--DLPKSVFDLTN 145 (195)
Q Consensus 103 ~~~---~~~~~~~~~~~~~--------~~~~~~~~n~~~~~~~--~~P~sw~DL~~ 145 (195)
.+. .....+|..+++. ....++.||.+.++.. +.|++|+||.+
T Consensus 135 ~~~~~~~~~~~dG~~Y~iP~~~~~~~~~~~~~~~ynkd~l~~~G~~~p~T~de~~~ 190 (535)
T 3omb_A 135 KPDAKKMSTDSKGRIYAIADGRGKAYSGTGQHMLINKAWLDKLGLQVPTTWDELEN 190 (535)
T ss_dssp CHHHHHHHCCTTSCCSSEEEECCGGGCSCSCEEEEEHHHHHHHTCCCCCBHHHHHH
T ss_pred HHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEEEHHHHHHCCCCCCCCHHHHHH
T ss_conf 47999861055983774235430011035448999837676559889988999999