HHSEARCH alignment of GI: 254780563 and SCOP domain: d1elja_

Alignment
>d1elja_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=98.65  E-value=3.7e-08  Score=63.66  Aligned_cols=121  Identities=12%  Similarity=0.161  Sum_probs=75.9

Q ss_pred             CCCCCCEEEECCCCH---HHHHHHHHHHHHHC-CCCCCCCCHHHHHHHH---HHHCCCCCEEEECC-HHHHHHHHHHHCC
Q ss_conf             445880899818998---99999999999875-9862100001356676---52106665575042-2332343310000
Q gi|254780563|r   23 ENTTKYLTLYTDQNQ---SVMLPIIHSFEERT-GVKISPIYTSSIQRPP---ITQGSPVDVIITKD-ETSLALNEDLLHK   94 (195)
Q Consensus        23 ~~~~~~lvVYs~~~~---~~~~~~~~~Fek~t-gIkV~~~~~~~~~~~~---~~~~~~~d~~~~~d-~~~l~~~~~~l~~   94 (195)
                      +.++++|||+.+.+.   +..++++++|++++ ||+|+++..+.....+   ...++..|++.... ........|++.+
T Consensus         2 k~~eg~i~~W~~~~~~~~~~~~~~~~~F~~~~p~I~v~~~~~~~~~~~l~~~~~~g~~pDi~~~~~~~~~~~~~~g~l~~   81 (380)
T d1elja_           2 KIEEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKPNLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLEP   81 (380)
T ss_dssp             CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCTTEEEEEEECTTHHHHHHHHTTTTCSCSEEEEEGGGHHHHHHTTCBCC
T ss_pred             CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCC
T ss_conf             87663899995898038999999999999878397999986899999999999769998199999377999998799630


Q ss_pred             CCCC----CCCCCCCCCCC---CCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCC
Q ss_conf             1234----22234720001---22222--3443450588873344013445578888408
Q gi|254780563|r   95 LPAH----LIKKNSFVLKN---ENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTN  145 (195)
Q Consensus        95 ~~~~----~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~  145 (195)
                      +..-    ..+...+...+   .+|..  +|......++.||++.+..  +|+||+||.+
T Consensus        82 l~~~~~~~~~~~~~~~~~~~~~~dG~~y~~P~~~~~~~l~ynkd~~~~--~P~T~~e~~~  139 (380)
T d1elja_          82 IDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSE--PPKTFDEMKA  139 (380)
T ss_dssp             CTTTCCHHHHTTBCHHHHHHTEETTEECEEEEEEEECEEEEETTTCSS--CCSSHHHHHH
T ss_pred             CCHHHHHCCCCCCCHHHHHHEEECCEECCCCCCCCCHHHHHHHHHHHH--CCCCHHHHHH
T ss_conf             866540022111216666410345430112222210356666667642--1332899999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: D-maltodextrin-binding protein, MBP
species: Archaeon Pyrococcus furiosus [TaxId: 2261]