HHSEARCH alignment of GI: 254780563 and SCOP domain: d1sbpa_

Alignment
>d1sbpa_ c.94.1.1 (A:) Sulphate-binding protein {Salmonella typhimurium [TaxId: 90371]}
Probab=99.43  E-value=7.2e-13  Score=90.53  Aligned_cols=149  Identities=11%  Similarity=-0.002  Sum_probs=92.9

Q ss_pred             CEEEECC-CCHHHHHHHHHHH----HHHCCCCCCCC--CHHHHHHHH-HHHCCCCCEEEECCHHHH--HHHHHHHCCCCC
Q ss_conf             0899818-9989999999999----98759862100--001356676-521066655750422332--343310000123
Q gi|254780563|r   28 YLTLYTD-QNQSVMLPIIHSF----EERTGVKISPI--YTSSIQRPP-ITQGSPVDVIITKDETSL--ALNEDLLHKLPA   97 (195)
Q Consensus        28 ~lvVYs~-~~~~~~~~~~~~F----ek~tgIkV~~~--~~~~~~~~~-~~~~~~~d~~~~~d~~~l--~~~~~~l~~~~~   97 (195)
                      +|+--|+ ..+++.+++.++|    +++|||+|++.  .+++.++.. ..++.++|++++.+...+  ..+.|++.+.  
T Consensus         4 ~~~~~~y~~~~e~~~ei~~af~~~~~~~tG~~V~v~~~~~gsg~~~~~i~~g~~aDV~~~a~~~~~~~l~~~gll~~~--   81 (309)
T d1sbpa_           4 QLLNVSYDPTRELYEQYNKAFSAHWKQETGDNVVIDQSHGGSGKQATSVINGIEADTVTLALAYDVNAIAERGRIDKN--   81 (309)
T ss_dssp             EEEEEECSTTHHHHHHHHHHHHHHHHHHHSCEEEEEEEESCHHHHHHHHHTTCCCSEEEESSHHHHHHHHHTTSSCTT--
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC--
T ss_conf             799986124299999999999999877019977999647865999999975999889996778889999977985531--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHHHHH----HHHHHHH-
Q ss_conf             42223472000122222344345058887334401344557888840866768599628983049999----9999960-
Q gi|254780563|r   98 HLIKKNSFVLKNENKKLMRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFHRLL----NTMEQTP-  172 (195)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~~~~----~a~~~~~-  172 (195)
                               .+....++..+.....++++|++..   ..|++|.||++|.+|+.+..|.+++++....    ....... 
T Consensus        82 ---------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~w~dL~~~~~k~~~~~p~~~~~g~~~~~~~~~~~~~~~~  149 (309)
T d1sbpa_          82 ---------WIKRLPDDSAPYTSTIVFLVRKGNP---KQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAWGYALHHNN  149 (309)
T ss_dssp             ---------GGGGSHHHHCSEEBCEEEEEETTCT---TCCCSGGGGGSTTCCEECCCTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred             ---------CHHCCCCCCEEEEEEEEEEECCCCC---CCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             ---------0000355630342005899727886---5654023320012210123344662038999999864430254


Q ss_pred             -CHHHHHHHHHHHHHCCCC
Q ss_conf             -869999999998608870
Q gi|254780563|r  173 -NKTVVQDFIKNITANEIL  190 (195)
Q Consensus       173 -G~~~~~~~l~~l~~N~~~  190 (195)
                       .++.+++|+++|..|+..
T Consensus       150 ~~~~~~~~~~~~l~~~~~~  168 (309)
T d1sbpa_         150 NDQAKAEDFVKALFKNVEV  168 (309)
T ss_dssp             TCHHHHHHHHHHHHHTEEE
T ss_pred             CHHHHHHHHHHHHHCCCCE
T ss_conf             1678999999987514744


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Sulphate-binding protein
species: Salmonella typhimurium [TaxId: 90371]