HHSEARCH alignment of GI: 254780563 and SCOP domain: d1ursa_

Alignment
>d1ursa_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Alicyclobacillus acidocaldarius [TaxId: 405212]}
Probab=98.64  E-value=2.1e-07  Score=59.39  Aligned_cols=162  Identities=12%  Similarity=0.181  Sum_probs=90.8

Q ss_pred             CCEEEECCCCHH---HHHHHHHHHHHHCCCCC-CCCCHH--H-HHHHH--HHHCCCCCEEEECC--HHHHHHHHHHHCCC
Q ss_conf             808998189989---99999999998759862-100001--3-56676--52106665575042--23323433100001
Q gi|254780563|r   27 KYLTLYTDQNQS---VMLPIIHSFEERTGVKI-SPIYTS--S-IQRPP--ITQGSPVDVIITKD--ETSLALNEDLLHKL   95 (195)
Q Consensus        27 ~~lvVYs~~~~~---~~~~~~~~Fek~tgIkV-~~~~~~--~-~~~~~--~~~~~~~d~~~~~d--~~~l~~~~~~l~~~   95 (195)
                      ++|+|+++....   ..+.++++|+++||+.+ ++....  . .+++.  ...++..|++...+  ........|++.++
T Consensus         1 qTIt~w~~~~~~~~~~~~~~~~~F~~~~p~~~v~~~~~~~~~~~~~l~~~~~ag~~pDi~~~~~~~~~~~~~~~g~l~~L   80 (367)
T d1ursa_           1 QTITVWSWQTGPELQDVKQIAAQWAKAHGDKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPV   80 (367)
T ss_dssp             CEEEEEESCCHHHHHHHHHHHHHHHHHHCCEEEEEECTTCTTCTTHHHHHHHTTCCCSEEEEEEGGGHHHHHHTTCBCCC
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCC
T ss_conf             97999827884579999999999999879989999848828999999999966999839998582789999987995400


Q ss_pred             CCCCCC--CCCCCCCC---CCCCC--CCCCCCEEEEEEEHHHHCCCCCCCCHHHHCCHHHCCEEEECCCCCCHH-HHHHH
Q ss_conf             234222--34720001---22222--344345058887334401344557888840866768599628983049-99999
Q gi|254780563|r   96 PAHLIK--KNSFVLKN---ENKKL--MRISFDTQVLAYSTKRIKIADLPKSVFDLTNAQWKKRLSIAPNNISFH-RLLNT  167 (195)
Q Consensus        96 ~~~~~~--~~~~~~~~---~~~~~--~~~~~~~~~~~~n~~~~~~~~~P~sw~DL~~p~~kG~i~~~~~~~s~~-~~~~a  167 (195)
                      ......  ...+...+   .+|..  +|+.....++.||++.++  ++|+||+||.+..-+..+.....+..+. .++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~dG~~y~iP~~~~~~~l~yNk~~~~--~~p~T~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (367)
T d1ursa_          81 PSGVLNTGLYAPNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVP--QPPQTWAEFVKDANAHGFMYDQANLYFDYAIIGG  158 (367)
T ss_dssp             CTTSCCGGGSCHHHHHTTEETTEECSEEEEEEECEEEEETTTCS--SCCCSHHHHHHHHHHHCEECCTTCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCHHHHHHCEECCEEEEEECCCCCEEEEEECCCCC--CCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf             24554411479778854638877876420354158887401023--4310089999998663036677775210688875


Q ss_pred             HHH----H-----------H---CHHHHHHHHHHHHHCCCC
Q ss_conf             999----6-----------0---869999999998608870
Q gi|254780563|r  168 MEQ----T-----------P---NKTVVQDFIKNITANEIL  190 (195)
Q Consensus       168 ~~~----~-----------~---G~~~~~~~l~~l~~N~~~  190 (195)
                      ...    .           .   +..+++++++.|..++..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~~~  199 (367)
T d1ursa_         159 YGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHW  199 (367)
T ss_dssp             TTCEEEEEETTEEEEEEEESSSHHHHHHHHHHHHHHHTSCS
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             41022115886445431355888899999999999861365


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: D-maltodextrin-binding protein, MBP
species: Alicyclobacillus acidocaldarius [TaxId: 405212]