HHsearch alignment for GI: 254780564 and conserved domain: COG1653

>COG1653 UgpB ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].
Probab=97.94  E-value=3.4e-05  Score=48.77  Aligned_cols=83  Identities=25%  Similarity=0.328  Sum_probs=63.9

Q ss_pred             HHHHHHHCCC---CCCEEECCCCCC--CCCCEEEEEEEEEECCCCC-HHHHHHHHHHHHCHHHHHH-HHHHCCCCHHCCC
Q ss_conf             9999851487---853550465899--8510686541216316998-8999999999839999999-9740021001068
Q gi|254780564|r    6 SVAIFKNHHS---EVSVSYTPFLPK--DIGNILCSTVGGIAESSKK-KSVATQFLRFLLLPIVQQY-IATALGEYPIIKG   78 (107)
Q Consensus         6 y~~~~k~~~~---~~~v~~~~f~~~--D~G~~v~vsgagI~k~a~n-~~~A~kfiefLlS~e~Q~~-~a~~~~eyPv~~g   78 (107)
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~i~~~~~~~~~aA~~fi~~l~s~e~q~~~~~~~~g~~P~~~~  356 (433)
T COG1653         277 AIGYFKKAAGPKFDIGVAPLPAGPGGGGAAGGVGGGGLGVSKKSKKHKEAAWKFLEFLTSPEAQAELLAKVTGGLPVRKS  356 (433)
T ss_pred             HHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHH
T ss_conf             76666513454566468826878887875221155379997489866999999999976908788887741487876255


Q ss_pred             CCCCCCCCCC
Q ss_conf             7674210125
Q gi|254780564|r   79 IITNRKFNDQ   88 (107)
Q Consensus        79 V~~~~~~~~~   88 (107)
T Consensus       357 ~~~~~~~~~~  366 (433)
T COG1653         357 AYDDPYDKEA  366 (433)
T ss_pred             HHCCCCCCCH
T ss_conf             4306321210