HHsearch alignment for GI: 254780564 and conserved domain: PRK11205
>PRK11205 tbpA thiamine transporter substrate binding subunit; Provisional.
Probab=99.77 E-value=9.2e-19 Score=122.03 Aligned_cols=77 Identities=27% Similarity=0.353 Sum_probs=64.4
Q ss_pred CCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC-CCCCCCCHHHHHHCCC
Q ss_conf 51068654121631699889999999998399999999740021001068767421012554-4725658657863078
Q gi|254780564|r 29 IGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRKFNDQTY-TNRESFELIKTAQNPP 106 (107)
Q Consensus 29 ~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~~~~~~~-~~~d~~~l~~~a~n~p 106 (107)
T Consensus 237 eG~~~~iegagI~k~akn~e~A~kFidfllS~eaQ~~~~~~n~~yPV~~-~~lP~~~~~~~~p~~~~~~~~~~i~~~~~ 314 (326)
T PRK11205 237 EGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIPTGNWMYPVAK-VTLPAGFETLTKPATTLEFTPEEVAANRK 314 (326)
T ss_pred CCCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCEEEECCC-CCCCHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 8727776678983799998999999999758999998644054452488-87976477457986454579999999999