HHsearch alignment of GI: 254780564 and MMDB domain: 3c9h_A_

>3c9h_A (A:) ABC transporter, substrate binding protein; structural genomics, MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str}
Probab=98.83  E-value=2.7e-09  Score=70.56  Aligned_cols=85  Identities=18%  Similarity=0.211  Sum_probs=65.7

Q ss_pred             HHHHHHHHCCCC-CCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCC
Q ss_conf             899998514878-5355046589985106865412163169988999999999839999999974002100106876742
Q gi|254780564|r    5 SSVAIFKNHHSE-VSVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNR   83 (107)
Q Consensus         5 yy~~~~k~~~~~-~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~   83 (107)
                      .+...+...+.. +....    |.. |......+.+|.++|+|+++|.+||+||+|+|+|+.+++.....|+++.+..+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~----p~~-~~~~~~~~~~i~~~s~~~eaA~~fi~fl~s~e~q~~~~~~~g~~P~~~~~~~~~  310 (355)
T 3c9h_A          236 GSYAADWASRHPDVGIVL----PKD-YTVVMSRIGLVPEAAANPELGRRYLEFFMSKEGQTIMARQLQIPAVSPEVAGEN  310 (355)
T ss_dssp             HHHHHHHHHHCTTEEEEC----CSS-CEEEECCEEEEETTBSCHHHHHHHHHHHHSHHHHHHHHHHSCCCBCCTTCCSSS
T ss_pred             CHHHHHHHHCCCCEEEEE----ECC-CCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             237666640588436899----407-855633479997799767999999999769999999998378677786667854


Q ss_pred             CCCCCCCCCCC
Q ss_conf             10125544725
Q gi|254780564|r   84 KFNDQTYTNRE   94 (107)
Q Consensus        84 ~~~~~~~~~~d   94 (107)
                      .++........
T Consensus       311 ~~~~~~~~~~~  321 (355)
T 3c9h_A          311 TANTMQAIHGA  321 (355)
T ss_dssp             BHHHHHHHHGG
T ss_pred             CCCHHHHCCCC
T ss_conf             32101111222