HHsearch results for GI: 254780564 and protein with PDBid: 1y9u_A
>1y9u_A Putative iron binding protein; periplasmic binding protein, iron tyrosinate interaction, metal binding protein; 1.39A {Bordetella pertussis tohama I} SCOP: c.94.1.1 PDB: 2ows_A 2owt_A
Probab=99.69 E-value=1.9e-17 Score=113.80 Aligned_cols=83 Identities=19% Similarity=0.210 Sum_probs=77.7
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 58998510686541216316998899999999983999999997400210010687674210125544725658657863
Q gi|254780564|r 24 FLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRKFNDQTYTNRESFELIKTAQ 103 (107)
Q Consensus 24 f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~~~~~~~~~~d~~~l~~~a~ 103 (107)
+...+.|+++.+.+++|+|+|+|+++|++||+||+|+|+|+.+++.+++||++++|..++.+++++.++++.+++..+++
T Consensus 228 ~~~p~~G~~~~~~~~~i~k~a~n~~~A~~Fi~fllspe~Q~~la~~~~~~Pv~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 307 (323)
T 1y9u_A 228 ATAKDGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAK 307 (323)
T ss_dssp C----CCBCEEEEEEEEETTCTTHHHHHHHHHHHTSHHHHHHHHHHTTCEESSTTCCCCHHHHHTCCCCBCCSCTHHHHH
T ss_pred CCCCCCCCEEEECHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
T ss_conf 46788873210011220468986799999999853999999999845452178999998001675435877689999986
Q ss_pred CCC
Q ss_conf 078
Q gi|254780564|r 104 NPP 106 (107)
Q Consensus 104 n~p 106 (107)
+++
T Consensus 308 ~~~ 310 (323)
T 1y9u_A 308 YRK 310 (323)
T ss_dssp HHH
T ss_pred CCH
T ss_conf 349