HHsearch results for GI: 254780564 and protein with PDBid: 3c9h_A
>3c9h_A ABC transporter, substrate binding protein; structural genomics, MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str}
Probab=99.05 E-value=4.1e-10 Score=74.15 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=63.2
Q ss_pred HHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCC
Q ss_conf 89999851487853550465899851068654121631699889999999998399999999740021001068767421
Q gi|254780564|r 5 SSVAIFKNHHSEVSVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRK 84 (107)
Q Consensus 5 yy~~~~k~~~~~~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~ 84 (107)
++.......+......+ +.+ |.+..+.+++|.++|+|+++|.+||+||+|+|+|+.+++.....|+.+.|.....
T Consensus 237 ~~~~~~~~~~~~~~~~~----~~~-g~~~~~~~~~I~~~s~~~eaA~~Fi~fl~s~e~Q~~~a~~~~~~p~~~~v~~~~~ 311 (355)
T 3c9h_A 237 SYAADWASRHPDVGIVL----PKD-YTVVMSRIGLVPEAAANPELGRRYLEFFMSKEGQTIMARQLQIPAVSPEVAGENT 311 (355)
T ss_dssp HHHHHHHHHCTTEEEEC----CSS-CEEEECCEEEEETTBSCHHHHHHHHHHHHSHHHHHHHHHHSCCCBCCTTCCSSSB
T ss_pred HHHHHHHHCCCCEEEEE----CCC-CCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 88887764188716993----258-8466333468878999889999999997799999999983786778855578644
Q ss_pred CCCC
Q ss_conf 0125
Q gi|254780564|r 85 FNDQ 88 (107)
Q Consensus 85 ~~~~ 88 (107)
.+..
T Consensus 312 ~~~~ 315 (355)
T 3c9h_A 312 ANTM 315 (355)
T ss_dssp HHHH
T ss_pred CCHH
T ss_conf 3012