HHsearch results for GI: 254780564 and protein with PDBid: 3muq_A
>3muq_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.05A {Vibrio parahaemolyticus}
Probab=98.67 E-value=6.4e-08 Score=62.31 Aligned_cols=58 Identities=10% Similarity=0.100 Sum_probs=44.8
Q ss_pred HHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCH----HHHHHHHHHHHCHHHHHHHHH
Q ss_conf 999985148785355046589985106865412163169988----999999999839999999974
Q gi|254780564|r 6 SVAIFKNHHSEVSVSYTPFLPKDIGNILCSTVGGIAESSKKK----SVATQFLRFLLLPIVQQYIAT 68 (107)
Q Consensus 6 y~~~~k~~~~~~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~----~~A~kfiefLlS~e~Q~~~a~ 68 (107)
........+....+.. +. .+.+.++.+++++++++|+ ++|++|++||+|+++|+++++
T Consensus 173 ~~~~~~~~~~~~~i~~----~~-~~~~~~~y~~~i~~~~~~~~~~~~~Ak~FvdfL~S~eaQ~iia~ 234 (237)
T 3muq_A 173 GTWLAYQNKLDLEILF----QG-DEKLFNPYQVILVNPERYPTINYQGAKAFSDWLVNPRGQELING 234 (237)
T ss_dssp HHHHHHGGGCSCEEEE----CC-CGGGEEEEEEEEECTTTCTTSCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHHHHHCCCCCEEEEC----CC-CCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 5788752687427964----78-88642010499983756898898999999999789999999997