HHSEARCH alignment of GI: 254780564 and SCOP domain: d1pota_

Alignment

Probab=99.10  E-value=1.6e-10  Score=75.02  Aligned_cols=72  Identities=24%  Similarity=0.324  Sum_probs=60.3

Q ss_pred             HHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCC
Q ss_conf             78999985148785355046589985106865412163169988999999999839999999974002100106876
Q gi|254780564|r    4 ASSVAIFKNHHSEVSVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGII   80 (107)
Q Consensus         4 ~yy~~~~k~~~~~~~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~   80 (107)
                      ..........+.++.+..    |.+ |+++.+.+.+|.|+|+|+++|++||+||+|+|+|+.+++.++..|+.+.+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~----p~~-g~~~~~~~~~I~k~a~n~~~A~~fi~fl~s~e~q~~~~~~~g~~p~~~~a~  276 (322)
T d1pota_         205 NGSAFVARQAGTPIDVVW----PKE-GGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAAR  276 (322)
T ss_dssp             HHHHHHHHTTSCCEEEEC----CTT-CCEEEEEEEBCBTTCTTHHHHHHHHHHHHSHHHHHHHHHHHCCCCSBSTTT
T ss_pred             CHHHHHHHHHCCCCCEEE----CCC-CCEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf             143788875213431111----257-851522346875378898999999999708899999999868898587778

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Spermidine/putrescine-binding protein PotD
species: Escherichia coli [TaxId: 562]