HHSEARCH alignment of GI: 254780564 and SCOP domain: d1sbpa_

Alignment

Probab=98.87  E-value=2e-10  Score=74.55  Aligned_cols=74  Identities=19%  Similarity=0.286  Sum_probs=51.5

Q ss_pred             CHHHHHHHHHC--CCCCCEEECCCCCCC--CCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCC
Q ss_conf             47899998514--878535504658998--51068654121631699889999999998399999999740021001068
Q gi|254780564|r    3 NASSVAIFKNH--HSEVSVSYTPFLPKD--IGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKG   78 (107)
Q Consensus         3 n~yy~~~~k~~--~~~~~v~~~~f~~~D--~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~g   78 (107)
                      ..|++....+.  +..+.+++    |.+  ....-.+.+.++++.++|+++|++||+||+|+|+|++++... -.|+.++
T Consensus       192 ~~~~a~~~~~~~~~~~~~~v~----p~~~~~~~~~v~~~~~~~~~~~n~~~A~~FidfllS~egQ~i~~~~G-~~P~~~~  266 (309)
T d1sbpa_         192 WENEALLATNELGKDKFEIVT----PSESILAEPTVSVVDKVVEKKDTKAVAEAYLKYLYSPEGQEIAAKNF-YRPRDAD  266 (309)
T ss_dssp             EHHHHHHHHHTTTTTTEEEEC----CSEEECBCCEEEECHHHHHHHTCHHHHHHHHHGGGSHHHHHHHHHTT-CEESCHH
T ss_pred             ECCHHHHHHHHHCCCCEEEEC----CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHCC-CCCCCCC
T ss_conf             411999998764278537846----88766666776999721267888999999999963999999999859-9469933


Q ss_pred             CCC
Q ss_conf             767
Q gi|254780564|r   79 IIT   81 (107)
Q Consensus        79 V~~   81 (107)
                      |..
T Consensus       267 v~~  269 (309)
T d1sbpa_         267 VAK  269 (309)
T ss_dssp             HHH
T ss_pred             CCH
T ss_conf             040

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Sulphate-binding protein
species: Salmonella typhimurium [TaxId: 90371]