HHSEARCH alignment of GI: 254780564 and SCOP domain: d1y4ta_

Alignment

Probab=99.68  E-value=2.8e-17  Score=111.53  Aligned_cols=89  Identities=20%  Similarity=0.266  Sum_probs=80.6

Q ss_pred             CEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             35504658998510686541216316998899999999983999999997400210010687674210125544725658
Q gi|254780564|r   18 SVSYTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRKFNDQTYTNRESFE   97 (107)
Q Consensus        18 ~v~~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~~~~~~~~~~d~~~   97 (107)
                      ++...+..+.+.|+++.+.+++|.++|+|+++|.+||+||+|+|+|+.+++.+++||++++|..++.+++|+.++.+.++
T Consensus       217 ~~~~~~p~~~~~G~~~~~~~~~i~k~a~n~~~A~~fi~~l~spe~Q~~~a~~~~~~P~~~~v~~~~~~~~~~~~~~~~i~  296 (317)
T d1y4ta_         217 SLGIIFPNQDNRGTHINISGIAMTKSSKNQDAAKKFMEFMLSPEIQKILTDSNYEFPIRNDVELSQTVKDFGTFKEDQIP  296 (317)
T ss_dssp             TEEEECTTTTTTCBCEEEEEEEEETTCSCHHHHHHHHHHHTSHHHHHHHHHHHCCEESSTTSCCCHHHHHHCCCCBCCSC
T ss_pred             CCEEECCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             83043365578751788888998468877799999999963999999999736501277899898000683315877789


Q ss_pred             HHHHHHCCC
Q ss_conf             657863078
Q gi|254780564|r   98 LIKTAQNPP  106 (107)
Q Consensus        98 l~~~a~n~p  106 (107)
                      +..++++.+
T Consensus       297 ~~~~~~~~~  305 (317)
T d1y4ta_         297 VSKIAENIK  305 (317)
T ss_dssp             HHHHHTTHH
T ss_pred             HHHHHHHHH
T ss_conf             999987489

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Campylobacter jejuni [TaxId: 197]