HHSEARCH alignment of GI: 254780564 and SCOP domain: d1y9ua_

Alignment

Probab=99.69  E-value=1.1e-17  Score=113.84  Aligned_cols=86  Identities=20%  Similarity=0.186  Sum_probs=79.3

Q ss_pred             ECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             04658998510686541216316998899999999983999999997400210010687674210125544725658657
Q gi|254780564|r   21 YTPFLPKDIGNILCSTVGGIAESSKKKSVATQFLRFLLLPIVQQYIATALGEYPIIKGIITNRKFNDQTYTNRESFELIK  100 (107)
Q Consensus        21 ~~~f~~~D~G~~v~vsgagI~k~a~n~~~A~kfiefLlS~e~Q~~~a~~~~eyPv~~gV~~~~~~~~~~~~~~d~~~l~~  100 (107)
                      ...+...+.|+++.+.+++|+|+|+|+++|.+||+||+|+|+|+.+++.+++||++++|..++.++++..++++.+++.+
T Consensus       220 ~~~~~~p~~g~~~~~~~~~i~k~a~n~~~A~~Fi~~lls~e~Q~~~~~~~~~~Pv~~~v~~~~~~~~~~~~~~~~~~~~~  299 (318)
T d1y9ua_         220 PTFATAKDGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAE  299 (318)
T ss_dssp             CBCC----CCBCEEEEEEEEETTCTTHHHHHHHHHHHTSHHHHHHHHHHTTCEESSTTCCCCHHHHHTCCCCBCCSCTHH
T ss_pred             CCCCCCCCCCCEEECEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEECCCCCCCCHHHCCCCCCCCCCCCHHH
T ss_conf             53245788872210113577258974799999999962999999999736175178999898000675546867689999


Q ss_pred             HHHCCC
Q ss_conf             863078
Q gi|254780564|r  101 TAQNPP  106 (107)
Q Consensus       101 ~a~n~p  106 (107)
                      ++.+++
T Consensus       300 ~~~~~~  305 (318)
T d1y9ua_         300 IAKYRK  305 (318)
T ss_dssp             HHHHHH
T ss_pred             HHHCCH
T ss_conf             984649

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like II
superfamily: Periplasmic binding protein-like II
family: Phosphate binding protein-like
domain: Ferric-binding protein FbpA
species: Bordetella pertussis [TaxId: 520]