HHsearch alignment for GI: 254780567 and conserved domain: COG1162

Probab=95.17  E-value=0.024  Score=34.31  Aligned_cols=121  Identities=17%  Similarity=0.147  Sum_probs=66.8

Q ss_pred             CCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             88454165361899999998510167884999878777868899999986276201356764445466666653343321
Q gi|254780567|r   38 ISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDTRKPVLLEDID  117 (246)
Q Consensus        38 ~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iddi~  117 (246)
T Consensus       140 ~gy~v~~~s~~~~~~~~~l~~~l--~~~~svl~GqSGVGKSSLiN~L~p~~~~~t---~eIS~-------------~~~r  201 (301)
T COG1162         140 IGYPVLFVSAKNGDGLEELAELL--AGKITVLLGQSGVGKSTLINALLPELNQKT---GEISE-------------KLGR  201 (301)
T ss_pred             CCEEEEEECCCCCCCHHHHHHHH--CCCEEEEECCCCCCHHHHHHHHCCHHHHHH---HHHCC-------------CCCC
T ss_conf             79359995376765589999975--588499988887769998874172121134---42104-------------4789


Q ss_pred             CCCC-CCHHHHHHHHHHHCCCCCEEEE--------ECCCCCCHHHHHHHHHHHHHHC---CEEEECCCCHHHHHHH
Q ss_conf             0037-6103354555431123421564--------0354320022345667885212---2245078897899999
Q gi|254780567|r  118 LLDF-NDTQLFHIINSIHQYDSSLLMT--------ARTFPVSWGVCLPDLCSRLKAA---TVVKISLPDDDFLEKV  181 (246)
Q Consensus       118 ~~~~-~ee~lf~l~n~~~~~~~~iilt--------s~~~p~~~~~~l~DL~SRl~~g---~~~~I~~pdde~~~~i  181 (246)
T Consensus       202 GkHTTt~~~l~~l~-----~gG~iiDTPGf~~~~l~~~~~e~l~~~F~ef~~~~~~CkFr~C~H~~EPgCav~~av  272 (301)
T COG1162         202 GRHTTTHVELFPLP-----GGGWIIDTPGFRSLGLAHLEPEDLVQAFPEFAELARQCKFRDCTHTHEPGCAVKAAV  272 (301)
T ss_pred             CCCCCCEEEEEECC-----CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             88763248999838-----998897289977147456799999997699998726798889988899986889898