HHsearch alignment for GI: 254780567 and conserved domain: COG1223

>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.25  E-value=1.9e-10  Score=84.22  Aligned_cols=200  Identities=18%  Similarity=0.310  Sum_probs=132.2

Q ss_pred             CCCCCCCCEEECCCH-HHHHHHH----H---HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH----
Q ss_conf             766884541653618-9999999----8---510167884999878777868899999986276201356764445----
Q gi|254780567|r   35 CLGISRDDLLVHSAI-EQAVRLI----D---SWPSWPSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDS----  102 (246)
Q Consensus        35 ~~~~~~dnFiv~~~N-~~A~~~i----~---~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~----  102 (246)
T Consensus       115 ~~~it~ddVi-GqEeAK~kcrli~~yLenPe~Fg~WAPknVLFyGppGTGKTm~Akalane~kvp~l~vkat~liGehVG  193 (368)
T COG1223         115 ISDITLDDVI-GQEEAKRKCRLIMEYLENPERFGDWAPKNVLFYGPPGTGKTMMAKALANEAKVPLLLVKATELIGEHVG  193 (368)
T ss_pred             HCCCCHHHHH-CHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHH
T ss_conf             1366176641-639888887999999649687634575416877899964879999872545785487116888887743


Q ss_pred             ------------HHHHHHHHHHHHHHHCCCCC---C----------HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf             ------------46666665334332100376---1----------0335455543112342156403543200223456
Q gi|254780567|r  103 ------------ILIDTRKPVLLEDIDLLDFN---D----------TQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPD  157 (246)
Q Consensus       103 ------------~~~~~~~~i~iddi~~~~~~---e----------e~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~D  157 (246)
T Consensus       194 dgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L---D~a  270 (368)
T COG1223         194 DGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL---DPA  270 (368)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHC---CHH
T ss_conf             59899999999887519849984002455530457886454999999999850174457756999505984650---788


Q ss_pred             HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC-CCHHHHH-HHHHH-HHHHHHHHCCCCCHHH
Q ss_conf             6788521222450788978999999998666289798899999994066-7989999-99999-9999998477878899
Q gi|254780567|r  158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRME-RSLVFAE-KLVDK-MDNLALSRGMGITRSL  234 (246)
Q Consensus       158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~-Rs~~~l~-~~l~~-Ld~~sl~~kr~ITi~l  234 (246)
T Consensus       271 iRsRFEe--EIEF~LP~~eEr~~ile~y~k~~Plpv~~~-~~~~~~~t~g~SgRdikekvlK~aLh~Ai~ed~e~v~~ed  347 (368)
T COG1223         271 IRSRFEE--EIEFKLPNDEERLEILEYYAKKFPLPVDAD-LRYLAAKTKGMSGRDIKEKVLKTALHRAIAEDREKVERED  347 (368)
T ss_pred             HHHHHHH--EEEEECCCHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf             8865565--065648885899999999898589765568-9999998478772068999999999999871344433889


Q ss_pred             HHHHHHH
Q ss_conf             9999986
Q gi|254780567|r  235 AAEVLKE  241 (246)
Q Consensus       235 vk~vL~~  241 (246)
T Consensus       348 ie~al~k  354 (368)
T COG1223         348 IEKALKK  354 (368)
T ss_pred             HHHHHHH
T ss_conf             9999986