HHsearch alignment for GI: 254780567 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=99.25 E-value=1.9e-10 Score=84.22 Aligned_cols=200 Identities=18% Similarity=0.310 Sum_probs=132.2
Q ss_pred CCCCCCCCEEECCCH-HHHHHHH----H---HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH----
Q ss_conf 766884541653618-9999999----8---510167884999878777868899999986276201356764445----
Q gi|254780567|r 35 CLGISRDDLLVHSAI-EQAVRLI----D---SWPSWPSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDS---- 102 (246)
Q Consensus 35 ~~~~~~dnFiv~~~N-~~A~~~i----~---~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~---- 102 (246)
T Consensus 115 ~~~it~ddVi-GqEeAK~kcrli~~yLenPe~Fg~WAPknVLFyGppGTGKTm~Akalane~kvp~l~vkat~liGehVG 193 (368)
T COG1223 115 ISDITLDDVI-GQEEAKRKCRLIMEYLENPERFGDWAPKNVLFYGPPGTGKTMMAKALANEAKVPLLLVKATELIGEHVG 193 (368)
T ss_pred HCCCCHHHHH-CHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHHHH
T ss_conf 1366176641-639888887999999649687634575416877899964879999872545785487116888887743
Q ss_pred ------------HHHHHHHHHHHHHHHCCCCC---C----------HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf ------------46666665334332100376---1----------0335455543112342156403543200223456
Q gi|254780567|r 103 ------------ILIDTRKPVLLEDIDLLDFN---D----------TQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPD 157 (246)
Q Consensus 103 ------------~~~~~~~~i~iddi~~~~~~---e----------e~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~D 157 (246)
T Consensus 194 dgar~Ihely~rA~~~aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L---D~a 270 (368)
T COG1223 194 DGARRIHELYERARKAAPCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL---DPA 270 (368)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHC---CHH
T ss_conf 59899999999887519849984002455530457886454999999999850174457756999505984650---788
Q ss_pred HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC-CCHHHHH-HHHHH-HHHHHHHHCCCCCHHH
Q ss_conf 6788521222450788978999999998666289798899999994066-7989999-99999-9999998477878899
Q gi|254780567|r 158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRME-RSLVFAE-KLVDK-MDNLALSRGMGITRSL 234 (246)
Q Consensus 158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~-Rs~~~l~-~~l~~-Ld~~sl~~kr~ITi~l 234 (246)
T Consensus 271 iRsRFEe--EIEF~LP~~eEr~~ile~y~k~~Plpv~~~-~~~~~~~t~g~SgRdikekvlK~aLh~Ai~ed~e~v~~ed 347 (368)
T COG1223 271 IRSRFEE--EIEFKLPNDEERLEILEYYAKKFPLPVDAD-LRYLAAKTKGMSGRDIKEKVLKTALHRAIAEDREKVERED 347 (368)
T ss_pred HHHHHHH--EEEEECCCHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 8865565--065648885899999999898589765568-9999998478772068999999999999871344433889
Q ss_pred HHHHHHH
Q ss_conf 9999986
Q gi|254780567|r 235 AAEVLKE 241 (246)
Q Consensus 235 vk~vL~~ 241 (246)
T Consensus 348 ie~al~k 354 (368)
T COG1223 348 IEKALKK 354 (368)
T ss_pred HHHHHHH
T ss_conf 9999986