HHsearch alignment for GI: 254780567 and conserved domain: COG1241
>COG1241 MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair].
Probab=95.01 E-value=0.13 Score=29.73 Aligned_cols=178 Identities=15% Similarity=0.139 Sum_probs=89.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH-CCCCHHHHHHH----------HHH----------HHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 49998787778688999999862-76201356764----------445----------4666666533433210037610
Q gi|254780567|r 66 VVILVGPSGSGKSCLANIWSDKS-RSTRFSNIAKS----------LDS----------ILIDTRKPVLLEDIDLLDFNDT 124 (246)
Q Consensus 66 ~l~i~G~~GsGKTHLl~a~~~~~-~~~~~~~~~~~----------~~~----------~~~~~~~~i~iddi~~~~~~ee 124 (246)
T Consensus 321 nILLvGDPgtaKSqlLk~v~~~aPr~vytsgkgss~~GLTAav~rd~~tge~~LeaGALVlAD~Gv~cIDEfdKm~~~dr 400 (682)
T COG1241 321 HILLVGDPGTAKSQLLKYVAKLAPRGVYTSGKGSSAAGLTAAVVRDKVTGEWVLEAGALVLADGGVCCIDEFDKMNEEDR 400 (682)
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEECCEEEEECCCEEEEEECCCCCHHHH
T ss_conf 69981798251999999988648840797264125457306999706776078867779992497799970567776789
Q ss_pred HHHHH-------------HHHHHCCCCCEEEEECCC---------CCCHHHHHHHHHHHHHHCCEEEE-CCCC-HHHHH-
Q ss_conf 33545-------------554311234215640354---------32002234566788521222450-7889-78999-
Q gi|254780567|r 125 QLFHI-------------INSIHQYDSSLLMTARTF---------PVSWGVCLPDLCSRLKAATVVKI-SLPD-DDFLE- 179 (246)
Q Consensus 125 ~lf~l-------------~n~~~~~~~~iilts~~~---------p~~~~~~l~DL~SRl~~g~~~~I-~~pd-de~~~- 179 (246)
T Consensus 401 ~aihEaMEQQtIsIaKAGI~atLnARcsvLAAaNP~~Gryd~~~~~~enI~l~~~lLSRFDLifvl~D~~d~~~D~~ia~ 480 (682)
T COG1241 401 VAIHEAMEQQTISIAKAGITATLNARCSVLAAANPKFGRYDPKKTVAENINLPAPLLSRFDLIFVLKDDPDEEKDEEIAE 480 (682)
T ss_pred HHHHHHHHHCEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHCCEEEEECCCCCCCCHHHHHH
T ss_conf 99999987527512055425411144445665188777679999978855898357751775477057888533599999
Q ss_pred HHHHHHH-----------------------------HHCC-C--CCCHHHHHHHHHCC----------------CCCHHH
Q ss_conf 9999986-----------------------------6628-9--79889999999406----------------679899
Q gi|254780567|r 180 KVIVKMF-----------------------------ADRQ-I--FIDKKLAAYIVQRM----------------ERSLVF 211 (246)
Q Consensus 180 ~il~k~~-----------------------------~~r~-i--~l~~~v~~yl~~r~----------------~Rs~~~ 211 (246)
T Consensus 481 hil~~h~~~~~~~~~~~~~~~~~~~~~~~~lrkYI~YAR~~v~P~lt~ea~e~l~~~Yv~~Rk~~~~~~~~~~~piT~Rq 560 (682)
T COG1241 481 HILDKHRGEEPEETISLDGVDEVEERDFELLRKYISYARKNVTPVLTEEAREELEDYYVEMRKKSALVEEKRTIPITARQ 560 (682)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
T ss_conf 99998634565322333322222346589999999987505896128999999999998765201223456754561999
Q ss_pred HHHHHHHHH-HHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 999999999-99998477878899999998674
Q gi|254780567|r 212 AEKLVDKMD-NLALSRGMGITRSLAAEVLKETQ 243 (246)
Q Consensus 212 l~~~l~~Ld-~~sl~~kr~ITi~lvk~vL~~~~ 243 (246)
T Consensus 561 LEsiiRLaeA~Ak~rLS~~V~~eD~~eAi~lv~ 593 (682)
T COG1241 561 LESIIRLAEAHAKMRLSDVVEEEDVDEAIRLVD 593 (682)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 999999999988654447778899999999999