HHsearch alignment for GI: 254780567 and conserved domain: COG1373

>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=98.01  E-value=0.00012  Score=48.40  Aligned_cols=169  Identities=17%  Similarity=0.170  Sum_probs=100.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCC--CHHHHHHHH--------HHHHHHHH----HHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             49998787778688999999862762--013567644--------45466666----65334332100376103354555
Q gi|254780567|r   66 VVILVGPSGSGKSCLANIWSDKSRST--RFSNIAKSL--------DSILIDTR----KPVLLEDIDLLDFNDTQLFHIIN  131 (246)
Q Consensus        66 ~l~i~G~~GsGKTHLl~a~~~~~~~~--~~~~~~~~~--------~~~~~~~~----~~i~iddi~~~~~~ee~lf~l~n  131 (246)
T Consensus        39 i~~i~GpR~~GKTtllk~l~~~~~~~~iy~~~~d~~~~~~~l~d~~~~~~~~~~~~~~yifLDEIq~v~~W~~~lk~l~d  118 (398)
T COG1373          39 IILILGPRQVGKTTLLKLLIKGLLEEIIYINFDDLRLDRIELLDLLRAYIELKEREKSYIFLDEIQNVPDWERALKYLYD  118 (398)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHC
T ss_conf             49998886477899999999747773599973620001356778999999852225745999833376108999999975


Q ss_pred             HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH-------------HHHHHHHHCCCCCC----
Q ss_conf             4311234215640354320022345667885212224507889789999-------------99998666289798----
Q gi|254780567|r  132 SIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK-------------VIVKMFADRQIFID----  194 (246)
Q Consensus       132 ~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~-------------il~k~~~~r~i~l~----  194 (246)
T Consensus       119 ~~~~---~v~itgsss~ll~~~~s~~L~GR---~~~~~l~PlSF~Efl~~~~~~~~~~~~~~~f~~Yl~~GGfP~~v~~~  192 (398)
T COG1373         119 RGNL---DVLITGSSSSLLSKEISESLAGR---GKDLELYPLSFREFLKLKGEEIEPSKLELLFEKYLETGGFPESVKAD  192 (398)
T ss_pred             CCCC---EEEEECCCHHHHCCCHHHHCCCC---EEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCC
T ss_conf             6775---09998371675413302324998---23789848888998641352100256799999987728985665265


Q ss_pred             HH---HHHHHHHCCCCCHHHHHH-----HHHHH-HHHHHHHCCCCCHHHHHHHHH
Q ss_conf             89---999999406679899999-----99999-999998477878899999998
Q gi|254780567|r  195 KK---LAAYIVQRMERSLVFAEK-----LVDKM-DNLALSRGMGITRSLAAEVLK  240 (246)
Q Consensus       195 ~~---v~~yl~~r~~Rs~~~l~~-----~l~~L-d~~sl~~kr~ITi~lvk~vL~  240 (246)
T Consensus       193 ~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~k~i~~~l~~~~g~~~s~~~l~~~l~  247 (398)
T COG1373         193 LSEKKLKEYLDTILKRDIIERGKIENADLMKRILRFLASNIGSPISYSSLARELK  247 (398)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             2356788999999876688763744479999999998750366456999999972