HHsearch alignment for GI: 254780567 and conserved domain: COG1373
>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=98.01 E-value=0.00012 Score=48.40 Aligned_cols=169 Identities=17% Similarity=0.170 Sum_probs=100.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC--CHHHHHHHH--------HHHHHHHH----HHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 49998787778688999999862762--013567644--------45466666----65334332100376103354555
Q gi|254780567|r 66 VVILVGPSGSGKSCLANIWSDKSRST--RFSNIAKSL--------DSILIDTR----KPVLLEDIDLLDFNDTQLFHIIN 131 (246)
Q Consensus 66 ~l~i~G~~GsGKTHLl~a~~~~~~~~--~~~~~~~~~--------~~~~~~~~----~~i~iddi~~~~~~ee~lf~l~n 131 (246)
T Consensus 39 i~~i~GpR~~GKTtllk~l~~~~~~~~iy~~~~d~~~~~~~l~d~~~~~~~~~~~~~~yifLDEIq~v~~W~~~lk~l~d 118 (398)
T COG1373 39 IILILGPRQVGKTTLLKLLIKGLLEEIIYINFDDLRLDRIELLDLLRAYIELKEREKSYIFLDEIQNVPDWERALKYLYD 118 (398)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHC
T ss_conf 49998886477899999999747773599973620001356778999999852225745999833376108999999975
Q ss_pred HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH-------------HHHHHHHHCCCCCC----
Q ss_conf 4311234215640354320022345667885212224507889789999-------------99998666289798----
Q gi|254780567|r 132 SIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK-------------VIVKMFADRQIFID---- 194 (246)
Q Consensus 132 ~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~-------------il~k~~~~r~i~l~---- 194 (246)
T Consensus 119 ~~~~---~v~itgsss~ll~~~~s~~L~GR---~~~~~l~PlSF~Efl~~~~~~~~~~~~~~~f~~Yl~~GGfP~~v~~~ 192 (398)
T COG1373 119 RGNL---DVLITGSSSSLLSKEISESLAGR---GKDLELYPLSFREFLKLKGEEIEPSKLELLFEKYLETGGFPESVKAD 192 (398)
T ss_pred CCCC---EEEEECCCHHHHCCCHHHHCCCC---EEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCC
T ss_conf 6775---09998371675413302324998---23789848888998641352100256799999987728985665265
Q ss_pred HH---HHHHHHHCCCCCHHHHHH-----HHHHH-HHHHHHHCCCCCHHHHHHHHH
Q ss_conf 89---999999406679899999-----99999-999998477878899999998
Q gi|254780567|r 195 KK---LAAYIVQRMERSLVFAEK-----LVDKM-DNLALSRGMGITRSLAAEVLK 240 (246)
Q Consensus 195 ~~---v~~yl~~r~~Rs~~~l~~-----~l~~L-d~~sl~~kr~ITi~lvk~vL~ 240 (246)
T Consensus 193 ~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~k~i~~~l~~~~g~~~s~~~l~~~l~ 247 (398)
T COG1373 193 LSEKKLKEYLDTILKRDIIERGKIENADLMKRILRFLASNIGSPISYSSLARELK 247 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 2356788999999876688763744479999999998750366456999999972