HHsearch alignment for GI: 254780567 and conserved domain: COG1466

>COG1466 HolA DNA polymerase III, delta subunit [DNA replication, recombination, and repair].
Probab=97.79  E-value=0.0016  Score=41.60  Aligned_cols=105  Identities=19%  Similarity=0.140  Sum_probs=77.4

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             34215640354320022345667885212224507889789999999986662897988999999940667989999999
Q gi|254780567|r  137 DSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLV  216 (246)
Q Consensus       137 ~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l  216 (246)
T Consensus       105 ~~~~l~~~~~kl~~~~~~~k~~~-~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~l~i~~~a~~~L~~~~~~nl~~i~~Ei  183 (334)
T COG1466         105 TDLLLLVESNKLDKAKKLTKWLK-KLAKAVVVECKPLDEAELPQWIKKRAKELGLKIDQEAIQLLLEALGGNLLAIAQEI  183 (334)
T ss_pred             CCEEEEEECCCCCHHHHHHHHHH-HHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHH
T ss_conf             86899996188752778789888-74447346625887788999999999991898899999999998588299999999


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHC
Q ss_conf             9999999984778788999999986741
Q gi|254780567|r  217 DKMDNLALSRGMGITRSLAAEVLKETQQ  244 (246)
Q Consensus       217 ~~Ld~~sl~~kr~ITi~lvk~vL~~~~~  244 (246)
T Consensus       184 ~KL~l~~--~~~~I~~~~V~~~v~~~~~  209 (334)
T COG1466         184 EKLALYA--GDKEITLEDVEEVVSDVAE  209 (334)
T ss_pred             HHHHHHC--CCCCCCHHHHHHHHCCCCC
T ss_conf             9998747--8986679999999736455