HHsearch alignment for GI: 254780567 and conserved domain: COG2804
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=95.24 E-value=0.042 Score=32.81 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=33.2
Q ss_pred CCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 8845416536189999999851016788499987877786889999998627
Q gi|254780567|r 38 ISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSR 89 (246)
Q Consensus 38 ~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~ 89 (246)
T Consensus 235 l~l~~Lg~~~~~~~---~~~~~~~~p~GliLvTGPTGSGKTTTLY~~L~~ln 283 (500)
T COG2804 235 LDLEKLGMSPFQLA---RLLRLLNRPQGLILVTGPTGSGKTTTLYAALSELN 283 (500)
T ss_pred CCHHHHCCCHHHHH---HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 88878389988999---99999728970899968999988999999999862