HHsearch alignment for GI: 254780567 and conserved domain: COG3267
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].
Probab=97.62 E-value=0.0038 Score=39.23 Aligned_cols=208 Identities=12% Similarity=0.089 Sum_probs=111.7
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC----C-CHHHHHHH
Q ss_conf 034155888776688454165361899999998510167884999878777868899999986276----2-01356764
Q gi|254780567|r 25 EEQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRS----T-RFSNIAKS 99 (246)
Q Consensus 25 ~~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~----~-~~~~~~~~ 99 (246)
T Consensus 16 ~~~~pf~~~~~~~~---~~~~a~h~e~-l~~l~~~i~d~qg~~~vtGevGsGKTv~~Ral~~s~~~d~~~~v~i~~~~~s 91 (269)
T COG3267 16 FSRLPFSWDIQPGL---DYWAADHNEA-LLMLHAAIADGQGILAVTGEVGSGKTVLRRALLASLNEDQVAVVVIDKPTLS 91 (269)
T ss_pred HCCCCCCCCHHHHH---HHHHHHHHHH-HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHH
T ss_conf 24488755403666---6432001599-9997777751785599974477763699999998557885179983576301
Q ss_pred H-----------HHH-------------------HHHHH--HHHHHHHHHCCCCCC-HHHHHHHHHHHCCCCC--EEEEE
Q ss_conf 4-----------454-------------------66666--653343321003761-0335455543112342--15640
Q gi|254780567|r 100 L-----------DSI-------------------LIDTR--KPVLLEDIDLLDFND-TQLFHIINSIHQYDSS--LLMTA 144 (246)
Q Consensus 100 ~-----------~~~-------------------~~~~~--~~i~iddi~~~~~~e-e~lf~l~n~~~~~~~~--iilts 144 (246)
T Consensus 92 ~~~~~~ai~~~l~~~p~~~~~~~~e~~~~~L~al~~~g~r~v~l~vdEah~L~~~~le~Lrll~nl~~~~~~~l~ivL~G 171 (269)
T COG3267 92 DATLLEAIVADLESQPKVNVNAVLEQIDRELAALVKKGKRPVVLMVDEAHDLNDSALEALRLLTNLEEDSSKLLSIVLIG 171 (269)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf 78899999998405832006889999999999999817887378501676617548999999886203466721145507
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCE-EEECCCCHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHCCCCCHHHHHHHHHH-H
Q ss_conf 35432002234566788521222-4507889789999999986662897---98899999994066798999999999-9
Q gi|254780567|r 145 RTFPVSWGVCLPDLCSRLKAATV-VKISLPDDDFLEKVIVKMFADRQIF---IDKKLAAYIVQRMERSLVFAEKLVDK-M 219 (246)
Q Consensus 145 ~~~p~~~~~~l~DL~SRl~~g~~-~~I~~pdde~~~~il~k~~~~r~i~---l~~~v~~yl~~r~~Rs~~~l~~~l~~-L 219 (246)
T Consensus 172 qp~L~~~-lr~~~l~e~~~R~~ir~~l~P~~~~~t~~yl~~~Le~a~~~~~l~~~~a~~~i~~~sqg~P~lin~~~~~Al 250 (269)
T COG3267 172 QPKLRPR-LRLPVLRELEQRIDIRIELPPLTEAETGLYLRHRLEGAGLPEPLFSDDALLLIHEASQGIPRLINNLATLAL 250 (269)
T ss_pred CCCCCHH-HCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 8011435-442889854316778995388674789999999985058996667705789999985255489999889999
Q ss_pred HHHHHHHCCCCCHHHHHH
Q ss_conf 999998477878899999
Q gi|254780567|r 220 DNLALSRGMGITRSLAAE 237 (246)
Q Consensus 220 d~~sl~~kr~ITi~lvk~ 237 (246)
T Consensus 251 ~~a~~a~~~~v~~a~~~~ 268 (269)
T COG3267 251 DAAYSAGEDGVSEAEIKN 268 (269)
T ss_pred HHHHHCCCCCCCHHHCCC
T ss_conf 999873997512565135