HHsearch alignment for GI: 254780567 and conserved domain: COG3284

>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=95.98  E-value=0.13  Score=29.77  Aligned_cols=178  Identities=16%  Similarity=0.252  Sum_probs=100.7

Q ss_pred             EEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC----HHH--HHHHHHHHH---------H--
Q ss_conf             16536189999999851016788499987877786889999998627620----135--676444546---------6--
Q gi|254780567|r   43 LLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRSTR----FSN--IAKSLDSIL---------I--  105 (246)
Q Consensus        43 Fiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~----~~~--~~~~~~~~~---------~--  105 (246)
T Consensus       316 ~~~d~s~a~l~rk~~rv~~~-~~pvll~GEtGtGKe~laraiH~~s~~~gpfvAvNCaAip~~liesELFGy~~GafTga  394 (606)
T COG3284         316 PLLDPSRATLLRKAERVAAT-DLPVLLQGETGTGKEVLARAIHQNSEAAGPFVAVNCAAIPEALIESELFGYVAGAFTGA  394 (606)
T ss_pred             CCCCHHHHHHHHHHHHHHHC-CCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             45578899999999887624-78768538765568999999985365569837998503447764677744576564330


Q ss_pred             --H---------HHHHHHHHHHHCCCCC-CHHHHHHHHHHHC---------CCCCEEEEECCCCCCH---HHHHHHHHHH
Q ss_conf             --6---------6665334332100376-1033545554311---------2342156403543200---2234566788
Q gi|254780567|r  106 --D---------TRKPVLLEDIDLLDFN-DTQLFHIINSIHQ---------YDSSLLMTARTFPVSW---GVCLPDLCSR  161 (246)
Q Consensus       106 --~---------~~~~i~iddi~~~~~~-ee~lf~l~n~~~~---------~~~~iilts~~~p~~~---~~~l~DL~SR  161 (246)
T Consensus       395 ~~kG~~g~~~~A~gGtlFldeIgd~p~~~Qs~LLrVl~e~~v~p~g~~~~~vdirvi~ath~dl~~lv~~g~fredLyyr  474 (606)
T COG3284         395 RRKGYKGKLEQADGGTLFLDEIGDMPLALQSRLLRVLQEGVVTPLGGTRIKVDIRVIAATHRDLAQLVEQGRFREDLYYR  474 (606)
T ss_pred             HHCCCCCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEEECCCCCHHHHHHCCCCHHHHHHH
T ss_conf             01066554101578760898761141899999999986182523588521577999834675799998759714878887


Q ss_pred             HHHCCEEEECCCCH-----HHHHHHHHHHHHHCCCCCCHHHHHHH-HHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             52122245078897-----89999999986662897988999999-9406679899999999999999
Q gi|254780567|r  162 LKAATVVKISLPDD-----DFLEKVIVKMFADRQIFIDKKLAAYI-VQRMERSLVFAEKLVDKMDNLA  223 (246)
Q Consensus       162 l~~g~~~~I~~pdd-----e~~~~il~k~~~~r~i~l~~~v~~yl-~~r~~Rs~~~l~~~l~~Ld~~s  223 (246)
T Consensus       475 L~~-~~i~lP~lr~R~d~~~~l~~~~~~~~~-~~~~l~~~~~~~l~~~~WPGNirel~~v~~~~~~l~  540 (606)
T COG3284         475 LNA-FVITLPPLRERSDRIPLLDRILKREND-WRLQLDDDALARLLAYRWPGNIRELDNVIERLAALS  540 (606)
T ss_pred             HCC-EEECCCCHHCCCCCHHHHHHHHHHCCC-CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
T ss_conf             447-155068611046657899999987268-775689999999985789982899999999998707