HHsearch alignment for GI: 254780567 and conserved domain: KOG1514

Probab=98.50  E-value=3.6e-06  Score=57.88  Aligned_cols=190  Identities=15%  Similarity=0.153  Sum_probs=116.1

Q ss_pred             HHHHHHHH-C-CCCCEEEEECCCCCCHHHHHHHHHHHHC-----------------CCCH---HHHHHHH----------
Q ss_conf             99998510-1-6788499987877786889999998627-----------------6201---3567644----------
Q gi|254780567|r   53 VRLIDSWP-S-WPSRVVILVGPSGSGKSCLANIWSDKSR-----------------STRF---SNIAKSL----------  100 (246)
Q Consensus        53 ~~~i~~~~-~-~~~~~l~i~G~~GsGKTHLl~a~~~~~~-----------------~~~~---~~~~~~~----------  100 (246)
T Consensus       409 ~~f~~~~i~~~~~g~~mYIsGvPGtGKT~tV~~Vm~~Lq~~s~~~e~p~f~yveINgm~l~~~~~~Y~~I~~~lsg~~~~  488 (767)
T KOG1514         409 EDFLRSFISDQGLGSCMYISGVPGTGKTATVLEVMKELQTSSAQKELPKFDYVEINGLRLASPREIYEKIWEALSGERVT  488 (767)
T ss_pred             HHHHHHHCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEECCEEECCHHHHHHHHHHHCCCCCCC
T ss_conf             99999762777774079984699988321299999999987750578986079871446158899999999975557430


Q ss_pred             --------HHHH-----HHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH--HHHHHHHHHHHH
Q ss_conf             --------4546-----6666653343321003-76103354555431123421564035432002--234566788521
Q gi|254780567|r  101 --------DSIL-----IDTRKPVLLEDIDLLD-FNDTQLFHIINSIHQYDSSLLMTARTFPVSWG--VCLPDLCSRLKA  164 (246)
Q Consensus       101 --------~~~~-----~~~~~~i~iddi~~~~-~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~--~~l~DL~SRl~~  164 (246)
T Consensus       489 ~~~al~~L~~~f~~~k~~~~~~VvLiDElD~Lvtr~QdVlYn~fdWpt~~~sKLvvi~IaNTmdlPEr~l~nrvsSRlg-  567 (767)
T KOG1514         489 WDAALEALNFRFTVPKPKRSTTVVLIDELDILVTRSQDVLYNIFDWPTLKNSKLVVIAIANTMDLPERLLMNRVSSRLG-  567 (767)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCHHHHCC-
T ss_conf             7788999986541678787877999635787735209889777407767898669999516564779885431123306-


Q ss_pred             CCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HC----------CCCCHH
Q ss_conf             2224507889789999999986662897988999999940667989999999999999998-47----------787889
Q gi|254780567|r  165 ATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALS-RG----------MGITRS  233 (246)
Q Consensus       165 g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~-~k----------r~ITi~  233 (246)
T Consensus       568 ~tRi~F~pYth~qLq~Ii~~RL~~~-~~f~~~aielvarkVAavSGDaRraldic~RA~Eia~~~~~~~k~~~~q~v~~~  646 (767)
T KOG1514         568 LTRICFQPYTHEQLQEIISARLKGL-DAFENKAIELVARKVAAVSGDARRALDICRRAAEIAEERNVKGKLAVSQLVGIL  646 (767)
T ss_pred             CEEEECCCCCHHHHHHHHHHHCCCH-HHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHH
T ss_conf             5055137788999999999860315-431424899999887750422788889989999975422134555533244329


Q ss_pred             HHHHHHHHHHC
Q ss_conf             99999986741
Q gi|254780567|r  234 LAAEVLKETQQ  244 (246)
Q Consensus       234 lvk~vL~~~~~  244 (246)
T Consensus       647 ~v~~Ai~em~~  657 (767)
T KOG1514         647 HVMEAINEMLA  657 (767)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999998750