HHsearch alignment for GI: 254780567 and conserved domain: KOG1968

Probab=97.81  E-value=7.2e-05  Score=49.85  Aligned_cols=163  Identities=17%  Similarity=0.190  Sum_probs=105.6

Q ss_pred             HHHHHHHHH------------HCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHH-------------H-HHHH
Q ss_conf             999999851------------016788-499987877786889999998627620135676-------------4-4454
Q gi|254780567|r   51 QAVRLIDSW------------PSWPSR-VVILVGPSGSGKSCLANIWSDKSRSTRFSNIAK-------------S-LDSI  103 (246)
Q Consensus        51 ~A~~~i~~~------------~~~~~~-~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~-------------~-~~~~  103 (246)
T Consensus       331 ~~~~~l~~~k~~~~~sy~~~~~~ss~~~~~l~~G~pGigKT~~~h~~~k~~g~~v~E~Nas~~RSk~~l~~~~~~~~~s~  410 (871)
T KOG1968         331 KASKWLAKSKDKEKSSYKENEPDSSKKKALLLSGPPGIGKTTAAHKAAKELGFKVVEKNASDVRSKKELLNKLGNATSSH  410 (871)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCCC
T ss_conf             66658876221333540026861566778873178877720567663012065401047543344227776640244664


Q ss_pred             HHHH--------------HHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEE
Q ss_conf             6666--------------66533433210037610335455543-11234215640354320022345667885212224
Q gi|254780567|r  104 LIDT--------------RKPVLLEDIDLLDFNDTQLFHIINSI-HQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVV  168 (246)
Q Consensus       104 ~~~~--------------~~~i~iddi~~~~~~ee~lf~l~n~~-~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~  168 (246)
T Consensus       411 si~~~~~~~~~~~~~~~~~~vil~devD~~~~~dRg~v~~l~~l~~ks~~Piv~~cndr~------~p~sr~~~~~~~~l  484 (871)
T KOG1968         411 SIKGSKKKKGNRQSLNSDHFLILMDEVDGMFGEDRGGVSKLSSLCKKSSRPLVCTCNDRN------LPKSRALSRACSDL  484 (871)
T ss_pred             CHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC------CCCCCCHHHHCCEE
T ss_conf             000111111330004666069997425544200013699999999863577688733777------76652022320023


Q ss_pred             EECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             507889789999999986662897988999999940667989999999999
Q gi|254780567|r  169 KISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKM  219 (246)
Q Consensus       169 ~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~L  219 (246)
T Consensus       485 ~f~kP~~~~i~~ri~si~~se~~ki~~~~l~~~s~~~~~DiR~~i~~lq~~  535 (871)
T KOG1968         485 RFSKPSSELIRSRIMSICKSEGIKISDDVLEEISKLSGGDIRQIIMQLQFW  535 (871)
T ss_pred             EECCCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             404885777776665330246424172788999875064799999877644