HHsearch alignment for GI: 254780567 and conserved domain: KOG2004

Probab=98.31  E-value=4.2e-06  Score=57.46  Aligned_cols=152  Identities=18%  Similarity=0.278  Sum_probs=95.6

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH-----------------HHH-------HHHHHHHHHHHC
Q ss_conf             78849998787778688999999862762013567644454-----------------666-------666533433210
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSI-----------------LID-------TRKPVLLEDIDL  118 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~-----------------~~~-------~~~~i~iddi~~  118 (246)
T Consensus       437 qGkIlCf~GPPGVGKTSI~kSIA~ALnRkFfRfSvGG~tDvAeIkGHRRTYVGAMPGkiIq~LK~v~t~NPliLiDEvDK  516 (906)
T KOG2004         437 QGKILCFVGPPGVGKTSIAKSIARALNRKFFRFSVGGMTDVAEIKGHRRTYVGAMPGKIIQCLKKVKTENPLILIDEVDK  516 (906)
T ss_pred             CCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEHHHH
T ss_conf             88379986899877321899999984874699853663427764254211001488489999986177886588532234


Q ss_pred             CCC----CC-HH-------------HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
Q ss_conf             037----61-03-------------3545554311234215640354320022345667885212224507889789999
Q gi|254780567|r  119 LDF----ND-TQ-------------LFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK  180 (246)
Q Consensus       119 ~~~----~e-e~-------------lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~  180 (246)
T Consensus       517 lG~g~qGDPasALLElLDPEQNanFlDHYLdVp~D-LSkVLFicTAN~--idtIP~pLlDRME---vIelsGYv~eEKv~  590 (906)
T KOG2004         517 LGSGHQGDPASALLELLDPEQNANFLDHYLDVPVD-LSKVLFICTANV--IDTIPPPLLDRME---VIELSGYVAEEKVK  590 (906)
T ss_pred             HCCCCCCCHHHHHHHHCCHHHCCCHHHHCCCCCCC-HHHEEEEEECCC--CCCCCHHHHHHHH---EEECCCCCHHHHHH
T ss_conf             17887798689998743965355345420266421-110688985364--4569856641223---22036722798999


Q ss_pred             HHHHHHH----------HCCCCCCHHHHHHHHHCCCCC--HHHHHHHHHHHH
Q ss_conf             9999866----------628979889999999406679--899999999999
Q gi|254780567|r  181 VIVKMFA----------DRQIFIDKKLAAYIVQRMERS--LVFAEKLVDKMD  220 (246)
Q Consensus       181 il~k~~~----------~r~i~l~~~v~~yl~~r~~Rs--~~~l~~~l~~Ld  220 (246)
T Consensus       591 IA~~yLip~a~~~~gl~~e~v~is~~al~~lI~~YcrEaGVRnLqk~iekI~  642 (906)
T KOG2004         591 IAERYLIPQALKDCGLKPEQVKISDDALLALIERYCREAGVRNLQKQIEKIC  642 (906)
T ss_pred             HHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9998412578987499878658629999999999988876778999999999