HHsearch alignment for GI: 254780567 and conserved domain: PRK00149

>PRK00149 dnaA chromosomal replication initiation protein; Reviewed.
Probab=100.00  E-value=0  Score=332.49  Aligned_cols=216  Identities=19%  Similarity=0.220  Sum_probs=188.7

Q ss_pred             CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC---CCEEEEECCCCCCHHHHHHHHHHHH-----CCCCHHHHHHHH
Q ss_conf             55888776688454165361899999998510167---8849998787778688999999862-----762013567644
Q gi|254780567|r   29 FFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWP---SRVVILVGPSGSGKSCLANIWSDKS-----RSTRFSNIAKSL  100 (246)
Q Consensus        29 ~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~---~~~l~i~G~~GsGKTHLl~a~~~~~-----~~~~~~~~~~~~  100 (246)
T Consensus       107 ~~~~~Ln~~yTFdnFVvG~sN~lA~aAA~~Va~~pg~~yNPLfIyG~~GlGKTHLl~AIgn~~~~~~p~~~v~Y~tae~F  186 (447)
T PRK00149        107 NFRSNLNPKYTFDNFVVGKSNRLAHAAALAVAENPGKAYNPLFIYGGVGLGKTHLLHAIGNYILEKNPNAKVVYVSSEKF  186 (447)
T ss_pred             CCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHH
T ss_conf             45678885560326222698599999999998376767785589779988788999999999998589972899549999


Q ss_pred             HHH---------------HHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             454---------------6666665334332100376---1033545554311234215640354320022345667885
Q gi|254780567|r  101 DSI---------------LIDTRKPVLLEDIDLLDFN---DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRL  162 (246)
Q Consensus       101 ~~~---------------~~~~~~~i~iddi~~~~~~---ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl  162 (246)
T Consensus       187 ~~~~v~al~~~~~~~Fr~~yr~~DvLliDDiqfl~gk~~tqeeff~~fn~l~~~~kqiv~tsd~~P~~l~~l~~rL~SRf  266 (447)
T PRK00149        187 TNDFVKALRNNAMEEFKEKYRSVDVLLIDDIQFLAGKEKTQEEFFHTFNALHENNKQIVITSDRPPKELEGLEDRLRSRF  266 (447)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCHHHHHHH
T ss_conf             99999998518699999999728854321488860557799999999999998499689957889676565117788676


Q ss_pred             HHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             21222450788978999999998666289798899999994066798999999999999999847787889999999867
Q gi|254780567|r  163 KAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAEVLKET  242 (246)
Q Consensus       163 ~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~vL~~~  242 (246)
T Consensus       267 ~~Gl~~~i~~Pd~e~r~~Il~~k~~~~~~~l~~~v~~~iA~~~~~nvR~LeGal~~l~a~~~~~~~~i~~~~~~~~l~~~  346 (447)
T PRK00149        267 EWGLTVDIEPPDLETRVAILQKKAEEEGINLPNEVLEFIAKRIRSNIRELEGALNRLVAYASLTGRPITLELAKEALKDL  346 (447)
T ss_pred             HCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             37626510599999999999999997289999899999997126889999999999999999868999999999999987


Q ss_pred             HC
Q ss_conf             41
Q gi|254780567|r  243 QQ  244 (246)
Q Consensus       243 ~~  244 (246)
T Consensus       347 ~~  348 (447)
T PRK00149        347 LR  348 (447)
T ss_pred             HH
T ss_conf             40