HHsearch alignment for GI: 254780567 and conserved domain: PRK05642

Probab=100.00  E-value=0  Score=367.58  Aligned_cols=216  Identities=20%  Similarity=0.256  Sum_probs=189.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH----HCCCCCEEEEECCCCCCHHHHHHHHHHHHCC-----CCHH
Q ss_conf             103415588877668845416536189999999851----0167884999878777868899999986276-----2013
Q gi|254780567|r   24 KEEQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSW----PSWPSRVVILVGPSGSGKSCLANIWSDKSRS-----TRFS   94 (246)
Q Consensus        24 ~~~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~----~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~-----~~~~   94 (246)
T Consensus         2 ~p~QL~L~~~l~~~~tfdnFi~g~-N~~a~~~~~~l~~~~~~~~~~~l~i~G~~G~GKTHLL~A~~~~~~~~~~~~~yl~   80 (234)
T PRK05642          2 KPIQLPLGVRLRDDATFANYYPGA-NAAALGYVERLCEADAGWTESLIYLWGKDGVGRSHLLQAACLRFEQRGEPAVYLP   80 (234)
T ss_pred             CCCCCCCCCCCCCCCCHHCCCCCC-CHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             951226799999977730357187-5999999999876067877883899889999889999999999980799679978


Q ss_pred             HHHH-HH---HHHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCE
Q ss_conf             5676-44---4546666665334332100376---103354555431123421564035432002234566788521222
Q gi|254780567|r   95 NIAK-SL---DSILIDTRKPVLLEDIDLLDFN---DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATV  167 (246)
Q Consensus        95 ~~~~-~~---~~~~~~~~~~i~iddi~~~~~~---ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~  167 (246)
T Consensus        81 ~~~~~~~~~~~~~~l~~~d~l~IDDi~~i~g~~~~e~~lF~l~N~~~~~~~~llits~~~P~~l~~~l~DL~SRl~~~~~  160 (234)
T PRK05642         81 LAELLDRGPELLDNLEQYELVCIDDLDVIAGKADWEEALFHLFNRLRDSGRRLLLAASKSPRELPVKLPDLKSRLTLALV  160 (234)
T ss_pred             HHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHHHHHHHHCCCE
T ss_conf             99987544999862422798989364554688599999999999999839959995787955523001679999957812


Q ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             4507889789999999986662897988999999940667989999999999999998477878899999998
Q gi|254780567|r  168 VKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAEVLK  240 (246)
Q Consensus       168 ~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~vL~  240 (246)
T Consensus       161 ~~i~~l~d~~~~~iL~~~a~~rgi~l~~~v~~yl~~r~~R~~~~L~~~l~~Ld~~sl~~kr~iTiplvk~vLg  233 (234)
T PRK05642        161 FQMRGLSDEDKLRALQLRASRRGLHLTDEVGHFILTRGTRSMSALFDLLERLDQASLQAQRKLTIPFLKETLG  233 (234)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf             7514899899999999997754689998999999997358899999999999999998389999999999838