HHsearch alignment for GI: 254780567 and conserved domain: PRK05707
>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=97.20 E-value=0.0051 Score=38.47 Aligned_cols=112 Identities=23% Similarity=0.296 Sum_probs=59.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCH----------HHH--H-HHHH------------HHH---------------
Q ss_conf 84999878777868899999986276201----------356--7-6444------------546---------------
Q gi|254780567|r 65 RVVILVGPSGSGKSCLANIWSDKSRSTRF----------SNI--A-KSLD------------SIL--------------- 104 (246)
Q Consensus 65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~~----------~~~--~-~~~~------------~~~--------------- 104 (246)
T Consensus 23 HA~Lf~G~~G~GK~~lA~~~A~~LlC~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~~~~~ 102 (328)
T PRK05707 23 HAYLLHGPAGIGKRALAERLAAFLLCEAPQGGGACGSCKGCQLLAAGSHPDNFVLEPEEADKPIKVDQVRELVSFVVQTA 102 (328)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 04644799986799999999999848999998999888899998758999879984266677697999999999983176
Q ss_pred -HHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
Q ss_conf -666665334332100376-1033545554311234-2156403543200223456678852122245078897899999
Q gi|254780567|r 105 -IDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKV 181 (246)
Q Consensus 105 -~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~i 181 (246)
T Consensus 103 ~~g~~KV~iI~~Ae~m~~~AaNALLKtL---EEPp~~t~fiL~t~~~~~---lLpTI~SRCq---~~~~~~p~~e~~~~~ 173 (328)
T PRK05707 103 QLGGRKVVLIEPAEAMNRNAANALLKSL---EEPSGQTVLLLISHQPSR---LLPTIKSRCQ---QLACPLPSNEPSLQW 173 (328)
T ss_pred CCCCCEEEEEEHHHHHCHHHHHHHHHHH---HCCCCCEEEEEEECCHHH---CHHHHHHCCE---EEECCCCCHHHHHHH
T ss_conf 6789579995028773899999999985---078987599986099344---8258874141---334899899999999
Q ss_pred HHHH
Q ss_conf 9998
Q gi|254780567|r 182 IVKM 185 (246)
Q Consensus 182 l~k~ 185 (246)
T Consensus 174 L~~~ 177 (328)
T PRK05707 174 LQQA 177 (328)
T ss_pred HHHH
T ss_conf 9975