HHsearch alignment for GI: 254780567 and conserved domain: PRK05707

>PRK05707 DNA polymerase III subunit delta'; Validated.
Probab=97.20  E-value=0.0051  Score=38.47  Aligned_cols=112  Identities=23%  Similarity=0.296  Sum_probs=59.4

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCCH----------HHH--H-HHHH------------HHH---------------
Q ss_conf             84999878777868899999986276201----------356--7-6444------------546---------------
Q gi|254780567|r   65 RVVILVGPSGSGKSCLANIWSDKSRSTRF----------SNI--A-KSLD------------SIL---------------  104 (246)
Q Consensus        65 ~~l~i~G~~GsGKTHLl~a~~~~~~~~~~----------~~~--~-~~~~------------~~~---------------  104 (246)
T Consensus        23 HA~Lf~G~~G~GK~~lA~~~A~~LlC~~~~~~~~Cg~C~sC~~~~~~~HPD~~~i~pe~~~~~I~IdqIR~l~~~~~~~~  102 (328)
T PRK05707         23 HAYLLHGPAGIGKRALAERLAAFLLCEAPQGGGACGSCKGCQLLAAGSHPDNFVLEPEEADKPIKVDQVRELVSFVVQTA  102 (328)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             04644799986799999999999848999998999888899998758999879984266677697999999999983176


Q ss_pred             -HHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHH
Q ss_conf             -666665334332100376-1033545554311234-2156403543200223456678852122245078897899999
Q gi|254780567|r  105 -IDTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKV  181 (246)
Q Consensus       105 -~~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~i  181 (246)
T Consensus       103 ~~g~~KV~iI~~Ae~m~~~AaNALLKtL---EEPp~~t~fiL~t~~~~~---lLpTI~SRCq---~~~~~~p~~e~~~~~  173 (328)
T PRK05707        103 QLGGRKVVLIEPAEAMNRNAANALLKSL---EEPSGQTVLLLISHQPSR---LLPTIKSRCQ---QLACPLPSNEPSLQW  173 (328)
T ss_pred             CCCCCEEEEEEHHHHHCHHHHHHHHHHH---HCCCCCEEEEEEECCHHH---CHHHHHHCCE---EEECCCCCHHHHHHH
T ss_conf             6789579995028773899999999985---078987599986099344---8258874141---334899899999999


Q ss_pred             HHHH
Q ss_conf             9998
Q gi|254780567|r  182 IVKM  185 (246)
Q Consensus       182 l~k~  185 (246)
T Consensus       174 L~~~  177 (328)
T PRK05707        174 LQQA  177 (328)
T ss_pred             HHHH
T ss_conf             9975