HHsearch alignment for GI: 254780567 and conserved domain: PRK06585

>PRK06585 holA DNA polymerase III subunit delta; Reviewed.
Probab=97.59  E-value=0.0064  Score=37.87  Aligned_cols=184  Identities=16%  Similarity=0.150  Sum_probs=103.1

Q ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCC--------CCHHHHHHHHHHH----------HHHHHHHHHHHHH
Q ss_conf             998510167884999878777868899999986276--------2013567644454----------6666665334332
Q gi|254780567|r   55 LIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRS--------TRFSNIAKSLDSI----------LIDTRKPVLLEDI  116 (246)
Q Consensus        55 ~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~--------~~~~~~~~~~~~~----------~~~~~~~i~iddi  116 (246)
T Consensus        12 f~~~-p~~~~~~~LlyG~d~glv~e~~~~l~~~~~~~~~~~f~~~~l~~~el~~d~~~l~de~~t~slF~~~rlI~i~~~   90 (343)
T PRK06585         12 FLAR-PDGKIRAVLLYGPDRGLVRERARRLAKSVVDDPDDPFAVVRLDGDELDADPARLEDEANTISLFGGRRLIWVRAG   90 (343)
T ss_pred             HHHC-CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECC
T ss_conf             9819-864765899963876479999999999725566787415774799883399999999847687689848997268


Q ss_pred             HCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf             10037610335455543112342156403543200223456678852122245078897899999999866628979889
Q gi|254780567|r  117 DLLDFNDTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKK  196 (246)
Q Consensus       117 ~~~~~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~  196 (246)
T Consensus        91 ~d--~~~~~l~~~l~~-~~~~~~lIi~a~~L~k~s--kLrk~~e~~~~~~~i~cY~d~~~~l~~~i~~~l~~~g~~i~~~  165 (343)
T PRK06585         91 GK--SLAAALKALLAE-PPGDAFIVIEAGDLKKGS--SLRKLFETAASAAAIPCYADDERDLARLIDDELAKAGLRITPD  165 (343)
T ss_pred             CH--HHHHHHHHHHHC-CCCCEEEEEECCCCCCCC--HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHH
T ss_conf             72--569999999817-899828999738977311--8999998647869995006998899999999999829997799


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
Q ss_conf             9999994066798999999999999999847787889999999867418
Q gi|254780567|r  197 LAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAEVLKETQQC  245 (246)
Q Consensus       197 v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~vL~~~~~~  245 (246)
T Consensus       166 a~~~L~~~~g~d~~~~~~EleKL~ly~-~~~~~It~edv~~~v~~~~~~  213 (343)
T PRK06585        166 ARAYLVALLGGDRLASRNEIEKLALYA-HGKGEITLDDVRAVVGDASAL  213 (343)
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHH-CCCCCCCHHHHHHHHCCCCCC
T ss_conf             999999873427999999999999984-899978999999986864102