HHsearch alignment for GI: 254780567 and conserved domain: PRK06620

Probab=100.00  E-value=0  Score=373.77  Aligned_cols=209  Identities=27%  Similarity=0.488  Sum_probs=192.4

Q ss_pred             CCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCC-----CEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             341558887766884541653618999999985101678-----849998787778688999999862762013567644
Q gi|254780567|r   26 EQLFFSFPRCLGISRDDLLVHSAIEQAVRLIDSWPSWPS-----RVVILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSL  100 (246)
Q Consensus        26 ~Ql~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~~~~~~~-----~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~  100 (246)
T Consensus         1 ~Ql~~~l~~~~~~~~~dF~vs~~N~~A~~~i~~wp~~~~~~~~~~~l~I~Gp~gSGKTHL~~i~~~~~~a~~~~~~~~~-   79 (214)
T PRK06620          1 QQYIFRFTTSSKYHPDEFIVSSSNDQAYNIIKNWQCMFGVNPYKFTLLIKGPSSSGKTYLTKIWQNLSNAYIIKDIFFN-   79 (214)
T ss_pred             CCEECCCCCCCCCCCCCEEECCCHHHHHHHHHHCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEECHHHCC-
T ss_conf             9700279997778865868768699999999836302566865555999879999889999999998285881512145-


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
Q ss_conf             45466666653343321003761033545554311234215640354320022345667885212224507889789999
Q gi|254780567|r  101 DSILIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEK  180 (246)
Q Consensus       101 ~~~~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~  180 (246)
T Consensus        80 -~~~~~~~~~~iiddid~--~~e~~lfhlfN~~~~~~~~llits~~~p~~~--~L~DL~SRl~~~~~~~i~~PdD~l~~~  154 (214)
T PRK06620         80 -EEILEKYNAFIIEDIEN--WQEPALLHIFNIINEKQKYLLLTSSDKSRNF--TLPDLSSRIKSVLSILLNSPDDELIKI  154 (214)
T ss_pred             -HHHHHHCCCEEEECCCC--CCHHHHHHHHHHHHHCCCEEEEEECCCCCCC--CCCCHHHHHHCCCEEECCCCCHHHHHH
T ss_conf             -87884379379846775--7467999999999715987999827985224--535789998546443326989899999


Q ss_pred             HHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             999986662897988999999940667989999999999999998477878899999998
Q gi|254780567|r  181 VIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAEVLK  240 (246)
Q Consensus       181 il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~vL~  240 (246)
T Consensus       155 ll~k~~~~r~i~i~~~vi~yl~~ri~Rs~~~l~~~v~~ld~~sl~~kr~Iti~likevL~  214 (214)
T PRK06620        155 LIFKHFSISSVTISRQIIDFLLVNLPREYSKIIEILENINYFALISKRKITISLVKEVLN  214 (214)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf             999999986998875599999998517899999999999999998399988999999839