HHsearch alignment for GI: 254780567 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.31 E-value=1.4e-10 Score=85.03 Aligned_cols=200 Identities=15% Similarity=0.120 Sum_probs=128.1
Q ss_pred CCCCCCCCCCCCCCEEECCCHHHHHHHHHH-HHCCCC-CEEEEECCCCCCHHHHHHHHHHHHCCCCHH------------
Q ss_conf 558887766884541653618999999985-101678-849998787778688999999862762013------------
Q gi|254780567|r 29 FFSFPRCLGISRDDLLVHSAIEQAVRLIDS-WPSWPS-RVVILVGPSGSGKSCLANIWSDKSRSTRFS------------ 94 (246)
Q Consensus 29 ~l~~~~~~~~~~dnFiv~~~N~~A~~~i~~-~~~~~~-~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~------------ 94 (246)
T Consensus 10 ~la~KyRP~-~f~~li-GQ--~~~~~~l~n~i~~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c 85 (507)
T PRK06645 10 PFARKYRPS-NFAELQ-GQ--EVLVKVLSYTILNDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKC 85 (507)
T ss_pred EEEECCCCC-CHHHHC-CC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 643200799-765623-93--99999999999739966347745879978899999999996799988889988888887
Q ss_pred --HHHHHH-----------------H--HH---------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCE-EEE
Q ss_conf --567644-----------------4--54---------6666665334332100376103354555431123421-564
Q gi|254780567|r 95 --NIAKSL-----------------D--SI---------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSSL-LMT 143 (246)
Q Consensus 95 --~~~~~~-----------------~--~~---------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~i-ilt 143 (246)
T Consensus 86 ~~c~~i~~~~~~dv~EiDaas~~gv~~ir~l~~~~~~~p~~~~~kv~iidE~hmls~--~a~nallktlEepp~~~~Fi~ 163 (507)
T PRK06645 86 TNCISFNNHNHPDIIEIDAASKTSVDDIRRIIESAEYKPLQGKHKIFIIDEVHMLSK--GAFNALLKTLEEPPPHIIFIF 163 (507)
T ss_pred HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCH--HHHHHHHHHHHCCCCCEEEEE
T ss_conf 678998658999859963788888899999986355178767435899521422489--999999997427864438999
Q ss_pred ECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 03543200223456678852122245078897899999999866628979889999999406679899999999999999
Q gi|254780567|r 144 ARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLA 223 (246)
Q Consensus 144 s~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~s 223 (246)
T Consensus 164 atte~~kip---~ti~srcq---~f~~~~i~~~~i~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RDalslldqai~~~ 237 (507)
T PRK06645 164 ATTEVQKIP---ATIISRCQ---RYDLRRLSFEEIFKLLEYITKQENLKADIEALRIIAYKSEGSARDAVSILDQAASMS 237 (507)
T ss_pred ECCCHHHCC---HHHHHHCE---EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 748536483---78885432---787545997999999999999768777789999999855998678999999999975
Q ss_pred HHHCCCCCHHHHHHHHH
Q ss_conf 98477878899999998
Q gi|254780567|r 224 LSRGMGITRSLAAEVLK 240 (246)
Q Consensus 224 l~~kr~ITi~lvk~vL~ 240 (246)
T Consensus 238 ~~~~~~I~~~~V~~MLG 254 (507)
T PRK06645 238 AKSDNIISPQVINQMLG 254 (507)
T ss_pred CCCCCCCCHHHHHHHHC
T ss_conf 48987026999999838